| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1607 |
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| Symbol | |
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| ID | 4187083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1884307 |
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| End bp | 1886232 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071600 |
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| Product | outer membrane protein, TonB-dependent receptor |
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| Protein accession | YP_678217 |
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| Protein GI | 110638010 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.497868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.881416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTATA AAAATCATTT GATGCAATCA AGTACATTCA TACGTCTCAT TTTACTTGTA
TTACCTGTCT TAACAGGTAA CTACTATTGC TTTGCACAAA TTAATACAGA CTCTGTATAT
GTGATGCCTG TAATGCAGGT AAATGATTAC CGCTACAACG ATTTTTCTGC CGGAAGTAAA
TCTATTACGA TTGATTCGGC CTATTTAAAA AACAATCCCG GTTCACTGGC AGATGTATTA
AGTAACCAGT CATCGGTATA CATTAAAGCA TACGGTGTAT CTTCTCTTGC AAGTATATCC
GTACGCGGAG GTTCAGCTTC ACAGACACAA ACAACCATGA ATGGCATGAT CATGAACAGC
CCTACAACCG GACAGCTTGA TTATTCTACC ATTCCATCTT TCATTTTTAA TAATCTGCAG
ATTCAATATG GTTCTCAGGT TTCCTTAATG GGAAGCGGAG CTATAGGAGG CAGCGTACAT
TTATCCAATC AACAGGATTT TATAAAACGA AAACAAATAC GCATAACGTA CCAGCAGGCA
AGCTTCAGCT CGCTATTACC TATTGCATCT ATACGCGCAG GCGATTCAAC AAAACAATTA
TTTATTTCTG CGTATTATAA ACAGGCACAA AATAATATAG CTTATTTCAC TAATGCTGAA
AAAAAACGGA TTGATCACGC TGCACAAAAT CAAAAAGGAG TCTATGTCGA TTATAGTTTC
AGAATAAAAA ATCATACACT GAAATACTGG TCATGGTATC AACAGATGAA CCGTGATCTG
CCGGGTACAA CATCAGCGCT TTATTCAGAT GCGACGCAAT ACGACCGTAA CTGGAAACAG
GGGATTCAAT GGACATACGC GAAGAAACGC AACGTGATAC AAGGCAGGTT AGGGTATCAG
GAAGATAAAA TGAATTATGA ATCAGACACA TCAAATATCC ATTCTATTAT ATCAAGCAGA
ATTATTCAGG CAGAGCTGGA ATACCGCTAT CAGCTTAATA CGCATGTAAA TCTGTTAGCG
GGTTCTCAGC TGATTCTTCA GGAAGGGATG TCGGATAATT TTGTTACATC ATCTGTTCAT
CAAAATAAAT ATGCCGTATT TATTTCTTCA TCAATTCGTT TTCTTACTAA TAAACTAATT
TTCCTGCCGT CTGTTCGCCA GGAGTGGTGC AATACCTGGG TGCCATTCAC GCCATCGCTA
GGTATAAATT ATTTTATTTT TCCGACGTTA AAGCTTCATG GCTTAGCCGG TTATAATTAC
CGCATTCCCT CCTTGAATGA TTTGTATTGG AATCCGGGAG GAAACAACTC GTTAAAACCT
GAACACGGCT GGGGATATGA AGGAGGGCTT ACAATTGAAA AAAAATACCA TGCATTTGAA
ATCTATCAGG ATGTTACGGG ATATACACGA ACCATTTCAG ACTGGATTTT GTGGACACCC
AATAACGGTA TCTGGATGCC GGACAACATT CAACGCGTAT GGTCAAGAGG GCTTGAATTG
GAATCAGGTA TAAAAATTCA TTCCAGCAGA TATTCATTTC ATATACGTAA TTCTTTTGCC
TATACAAAAT CCACCAATGA GTCTGATCTG CAAAGCACAG ATCAGCGCTT AGGCAAACAA
CTGATCTATG TACCTTACTA TAAGAACTCC TTGTCAACAT CTATAGCTAC CAGACGCGTT
GAAGCCGGAA TGATTTACAA CTACACTTCC TGGAGTTTCA TTACCTCAGA TAATTCAGAT
TATTTAAACC CATATCATTT ATTTGATGTT TTTTCAAACA TTACACTTGA TTTAAAAAAA
GCAAAATCAA TACTCACACT AAGTGCACGC ATCAACAATC TCTTTAATAC AAACTATAAG
GTTGTGTCAA GCAGGCCTAT GCCGATGCGC AATTATCAAT TAACAATTTC TTATACATTC
AATTAA
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| Protein sequence | MIYKNHLMQS STFIRLILLV LPVLTGNYYC FAQINTDSVY VMPVMQVNDY RYNDFSAGSK
SITIDSAYLK NNPGSLADVL SNQSSVYIKA YGVSSLASIS VRGGSASQTQ TTMNGMIMNS
PTTGQLDYST IPSFIFNNLQ IQYGSQVSLM GSGAIGGSVH LSNQQDFIKR KQIRITYQQA
SFSSLLPIAS IRAGDSTKQL FISAYYKQAQ NNIAYFTNAE KKRIDHAAQN QKGVYVDYSF
RIKNHTLKYW SWYQQMNRDL PGTTSALYSD ATQYDRNWKQ GIQWTYAKKR NVIQGRLGYQ
EDKMNYESDT SNIHSIISSR IIQAELEYRY QLNTHVNLLA GSQLILQEGM SDNFVTSSVH
QNKYAVFISS SIRFLTNKLI FLPSVRQEWC NTWVPFTPSL GINYFIFPTL KLHGLAGYNY
RIPSLNDLYW NPGGNNSLKP EHGWGYEGGL TIEKKYHAFE IYQDVTGYTR TISDWILWTP
NNGIWMPDNI QRVWSRGLEL ESGIKIHSSR YSFHIRNSFA YTKSTNESDL QSTDQRLGKQ
LIYVPYYKNS LSTSIATRRV EAGMIYNYTS WSFITSDNSD YLNPYHLFDV FSNITLDLKK
AKSILTLSAR INNLFNTNYK VVSSRPMPMR NYQLTISYTF N
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