| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1605 |
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| Symbol | rpe |
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| ID | 4187081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1880819 |
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| End bp | 1881472 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638071598 |
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| Product | ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase) |
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| Protein accession | YP_678215 |
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| Protein GI | 110638008 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00660357 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.751371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAACG TACTTATAGC ACCAAGTGTA TTATCTGCAG ACTTCGCAAA TCTGGAGAGA
GATGTTAAAA TGATCAACTC CAGTAAAGCG GATTGGTTTC ATATTGATAT TATGGACGGC
GTTTTTGTTC CCAATATCTC TTTTGGATTT CCTGTTATGC AGGCAATTAA TAAACATGCA
GCAAAACCGT TGGATGTGCA TTTAATGATT GTAAATCCTG AGAAATATAT TCAGACATTT
AAAGACTCCG GTGCCGCAAA TATTTCTGTA CACTATGAAG CATGTACCCA CTTGCACCGT
ACCATTTATC AAATAAAAGA TGTTGGTTGT AAAGCAGGTA TTGCAATCAA TCCACATACA
CCTATTCATC TGTTAAAGGA TGTGATCAAA GACATTGATC TTGTTTGTAT GATGTCTGTA
AACCCGGGTT TTGGCGGACA GAAATTCATT GAACATACGT ACCAGAAAGT ACGGGATCTG
AAACAATTGA TACAGGAAAA CAATGCAAAC GTATTGATTG AAATAGATGG AGGCGTAAAT
GAAGTTACAG GACCTAAATT GGTTCAGGCA GGTGCAGATG TACTTGTTGC CGGCAATTAT
GTTTTCTCTG CAAAAGATCC TGTAGCAACA ATTGAACAAC TCAAAAATAT ATAA
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| Protein sequence | MANVLIAPSV LSADFANLER DVKMINSSKA DWFHIDIMDG VFVPNISFGF PVMQAINKHA
AKPLDVHLMI VNPEKYIQTF KDSGAANISV HYEACTHLHR TIYQIKDVGC KAGIAINPHT
PIHLLKDVIK DIDLVCMMSV NPGFGGQKFI EHTYQKVRDL KQLIQENNAN VLIEIDGGVN
EVTGPKLVQA GADVLVAGNY VFSAKDPVAT IEQLKNI
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