| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1565 |
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| Symbol | pepF |
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| ID | 4185599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1834942 |
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| End bp | 1836642 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071559 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_678176 |
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| Protein GI | 110637969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02289] oligoendopeptidase, M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.435983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.359191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA CATATCTTCC TGCTGATTTT AAAGTTACTA CCTGGGATGC ATTGAAACCG
TATTTTGAAG AACTGGTTTC AAGAAACATA GCCTCTTCGA ATGAATTATA TACCTGGTAT
CAGGATAGAA GCGAGTTTGA ATCTGCTATT TCTGAAGATC TCGGATGGCG CTATATCAAA
ATGACCTGTG ATACGACGAA TGAAGAAATT AAAAACGCGT TTAATTTTTT TGTATCTGAA
TTGCAGCCGG CCATGGCGCC GTATTCAAAC CAATTGGATA CGAAAGCGCT GGAAGACCCG
TTTTTAAAGG AACTGAAGGA TAAGGAAGGT TTTGATATCG TAATTAAATT GCTGGAAAAA
GATAAAAGCA TCTACCGCGA TGAAAACATT TCATTGTTTT CTGAAATAGA GCAAACAGCG
CATGAATTTG GCACCATTTC CGGAGCAATG ACCGTTACGA TTGACGGCAA AGAAATAACG
ATGCAGCAGG CATCCGATTA TCTGCTTCAG CTGGACAGAG TGAAAAGGGA AGAAGCCTGG
AGAAGAATAA ATGAAAGAAG ATATCAGGAA AAAGACACGT TAAATAATTT ATATACAACC
TTGATCGGTT TGCGCCATAA GGTTGCATTA AACGCAGGCT TTAAAAACTT CAGAGACTAT
ATGTTTACTG CTATGGGGCG TTTTGATTAC ACCCCTGCAG ATTGTTATGC ATTTCACGAT
GCAATTAAAT CTGAAGTTGT ACCGATCTTA AATACCTTAG CGGAAGAACG AAAAAAAGCG
TTGAATCTGG ATGCCTTAAA ACCATGGGAC CTGTCAGTAA ATTATTTCGG AAATACACCC
TTAAAACCAT TCAACGATGC AGATGATCTG ACTGAAAAAA CAATTGAATG TTTTGCAGCA
TTGGATGGTT ACACAGCAGA TTGTATCGCA ACGATGAAAC AAATGGGGCA CCTCGATCTG
ATGTCCCGCA AAGGAAAAGC ACCGGGTGGT TACAACTATC CGCTGGATGA AACCGGAGTG
CCCTTTATAT TCATGAATGC GACACAATCG CTTCGCGATT TAGTAACGAT GGTGCATGAA
GGCGGGCATG CCCTCCACTC ATTTTTAACA GCCGATCTGG AGCTGAATGT CTTTAAACAT
CCAACTTCTG AAGTTGCCGA ACTGGCTTCC ATGTCAATGG AACTGATGAG TATGGAGCAC
TGGGATATTT TCTTCACAGA TGCGAAAGAT CTTAATAGAG CAAAACGCGA ACATCTGGAA
AGTGTATTGC AAACCATGCC GTGGGTTGCA ACAATTGATC TGTTCCAGCA TACGATTTAT
CAGAAACCAG ATCATACACT TCAAGAAAGA GAGCAGATGT GGAAAGAGTC TTTCTATCCT
TTTTCTAATA ATACAACCGA CTGGAGCGGG CTGGAAAATT TCCGTTTAAC AGCCTGGCAA
AAACAACTTC ACTTATTTGA AGTTCCATTC TATTATATTG AATATGGAAT GGCTCAATTA
GGGGCAATTG CCGTTTGGAG AAACTATAAA AAAGATCCGG CGAAAGGATA TGAACGTTAC
AAAAAAGCAC TTTCATTGGG ATATAAAAAA TCAATCCCGG AAGTGTATAA AGCTGCCGGG
ATTAAATTTG ATTTCAGTAA AGACTACATC AAAGAATTGA TGGACTTTGT AAAAGAAGAG
TTGAAAACAT TAAGCTTATA A
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| Protein sequence | MKRTYLPADF KVTTWDALKP YFEELVSRNI ASSNELYTWY QDRSEFESAI SEDLGWRYIK
MTCDTTNEEI KNAFNFFVSE LQPAMAPYSN QLDTKALEDP FLKELKDKEG FDIVIKLLEK
DKSIYRDENI SLFSEIEQTA HEFGTISGAM TVTIDGKEIT MQQASDYLLQ LDRVKREEAW
RRINERRYQE KDTLNNLYTT LIGLRHKVAL NAGFKNFRDY MFTAMGRFDY TPADCYAFHD
AIKSEVVPIL NTLAEERKKA LNLDALKPWD LSVNYFGNTP LKPFNDADDL TEKTIECFAA
LDGYTADCIA TMKQMGHLDL MSRKGKAPGG YNYPLDETGV PFIFMNATQS LRDLVTMVHE
GGHALHSFLT ADLELNVFKH PTSEVAELAS MSMELMSMEH WDIFFTDAKD LNRAKREHLE
SVLQTMPWVA TIDLFQHTIY QKPDHTLQER EQMWKESFYP FSNNTTDWSG LENFRLTAWQ
KQLHLFEVPF YYIEYGMAQL GAIAVWRNYK KDPAKGYERY KKALSLGYKK SIPEVYKAAG
IKFDFSKDYI KELMDFVKEE LKTLSL
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