| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1535 |
|---|
| Symbol | |
|---|
| ID | 4184513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1788919 |
|---|
| End bp | 1789503 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638071529 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678146 |
|---|
| Protein GI | 110637939 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00720131 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.552167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA TAAACCATTC CATCGTTGTA AAAAAACAGT GTGCGTATAA AGATTCAACA
GGCACGCGTT GCAAAAACAC CTGTACATTA ACGCATCCCT ATTGCGAAAA ACACACGGAA
AGTGAACTTG GTTTTAAAGT TGCACAATCA ACGGTTCCGT TTGCAGGTTT AGGTTTGTTT
ACGTTAAAGA AAATTAAAAA AGGATCCGTA GCTCTTTTAT ACGAAGGAGA AAAACTAACG
GTTGAACAAT ATAATAAACG TTACGACAAA GAAGGTCATG GTGAGTACGG CATGACACTT
GGTAAAAAAC ATGTAATCGA TGCACGTAAG ACATCCTCTG GCTTAGGCCG TTTTGTATGC
GACTTCACAG GTTCGGATAA AAAAGCAAAT GTTGAATACC TGGATAACGA AGGAGTGATT
GAAATTGTAG CGAAGAAGAA AATCAAACCG GGCGAAGAAC TGCTTGTCGA TTACGGCGAT
GAAATGCGTA CGGCTATGGG TTTCCAGCCG GAGAAGAAAA AGAAAGACAA AAAGAAAAAG
TCGGATAAAT CTGAGAAGAA AGATAAAAAG AAGAAAAAGA AATAG
|
|---|
| Protein sequence | MTQINHSIVV KKQCAYKDST GTRCKNTCTL THPYCEKHTE SELGFKVAQS TVPFAGLGLF
TLKKIKKGSV ALLYEGEKLT VEQYNKRYDK EGHGEYGMTL GKKHVIDARK TSSGLGRFVC
DFTGSDKKAN VEYLDNEGVI EIVAKKKIKP GEELLVDYGD EMRTAMGFQP EKKKKDKKKK
SDKSEKKDKK KKKK
|
|---|
| |