Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1518 |
Symbol | |
ID | 4183996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1752938 |
End bp | 1753777 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071512 |
Product | hydrolase |
Protein accession | YP_678129 |
Protein GI | 110637922 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.138259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.417814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTTT TTGCGATAAA CGCAGGAAAC TTTAAACTAG ACGGGGGAGC CATGTTCGGC GTGGTTCCCA AGTCTATCTG GAATAAATTA AACCCCGCTG ATTCAAACAA TCTTTGCACC TGGGCAACCC GATGCCTGCT TATTGAAAAC GGTAAGCAGC TGGTATTGAT CGATACCGGC TTAGGTGATA AACAGGATGA ATCATTTTTC AGGCACTATT ACCGGGATAC TCCGCAAACC TGGGATACAT TATTAAAACC GTATGGCTTT CATTCTTCTG ACATTACAGA TGTAGTATTA ACGCATTTAC ATTTTGACCA TGTGGGCGGC GCACTTGAAA AAAAAGGAGA TAAGATTGTT CCGACCTTCT CTAATGCGCG CTACTGGAGC AATACACGTC ATTGGGACTG GGCAGTTGAG CCGAACCCCA GAGAGAAAGC AAGCTTTCTG AAAGATAATT TATTTCCTTT GCAGGAATCC GGTCAGCTTT ATTTTGTTGA TACTCAAAAT CTGCCCTTTG AGTGGATGGA TTTTATTTTC GTTGATGGAC ATACCGAACA GCAGATGCTG CCGTTGATCA CAACACCCGC AGAAAAAAAA ATACTGTATG CCGCCGATCT GCTTCCTTCT GCCGGTCATA TACCCATGCC GTATATTATG AGTTATGATG TACGGCCATT GGTGTCGATG CAGGAAAAAG AACGCGTTTT TAACCAGGTC TTAGCGGAAG ACTGGACTGT TTTTTTGGAG CATGATCTGA GCAATGCCTG TATTTCCCTG CAGCAAACGG AAAAAGGCAT ACGTTTAAAT AACGTATTTC AAATAAGCGA TTTCAATTAA
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Protein sequence | MRLFAINAGN FKLDGGAMFG VVPKSIWNKL NPADSNNLCT WATRCLLIEN GKQLVLIDTG LGDKQDESFF RHYYRDTPQT WDTLLKPYGF HSSDITDVVL THLHFDHVGG ALEKKGDKIV PTFSNARYWS NTRHWDWAVE PNPREKASFL KDNLFPLQES GQLYFVDTQN LPFEWMDFIF VDGHTEQQML PLITTPAEKK ILYAADLLPS AGHIPMPYIM SYDVRPLVSM QEKERVFNQV LAEDWTVFLE HDLSNACISL QQTEKGIRLN NVFQISDFN
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