Gene CHU_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1518 
Symbol 
ID4183996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1752938 
End bp1753777 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content43% 
IMG OID638071512 
Producthydrolase 
Protein accessionYP_678129 
Protein GI110637922 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.138259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTT TTGCGATAAA CGCAGGAAAC TTTAAACTAG ACGGGGGAGC CATGTTCGGC 
GTGGTTCCCA AGTCTATCTG GAATAAATTA AACCCCGCTG ATTCAAACAA TCTTTGCACC
TGGGCAACCC GATGCCTGCT TATTGAAAAC GGTAAGCAGC TGGTATTGAT CGATACCGGC
TTAGGTGATA AACAGGATGA ATCATTTTTC AGGCACTATT ACCGGGATAC TCCGCAAACC
TGGGATACAT TATTAAAACC GTATGGCTTT CATTCTTCTG ACATTACAGA TGTAGTATTA
ACGCATTTAC ATTTTGACCA TGTGGGCGGC GCACTTGAAA AAAAAGGAGA TAAGATTGTT
CCGACCTTCT CTAATGCGCG CTACTGGAGC AATACACGTC ATTGGGACTG GGCAGTTGAG
CCGAACCCCA GAGAGAAAGC AAGCTTTCTG AAAGATAATT TATTTCCTTT GCAGGAATCC
GGTCAGCTTT ATTTTGTTGA TACTCAAAAT CTGCCCTTTG AGTGGATGGA TTTTATTTTC
GTTGATGGAC ATACCGAACA GCAGATGCTG CCGTTGATCA CAACACCCGC AGAAAAAAAA
ATACTGTATG CCGCCGATCT GCTTCCTTCT GCCGGTCATA TACCCATGCC GTATATTATG
AGTTATGATG TACGGCCATT GGTGTCGATG CAGGAAAAAG AACGCGTTTT TAACCAGGTC
TTAGCGGAAG ACTGGACTGT TTTTTTGGAG CATGATCTGA GCAATGCCTG TATTTCCCTG
CAGCAAACGG AAAAAGGCAT ACGTTTAAAT AACGTATTTC AAATAAGCGA TTTCAATTAA
 
Protein sequence
MRLFAINAGN FKLDGGAMFG VVPKSIWNKL NPADSNNLCT WATRCLLIEN GKQLVLIDTG 
LGDKQDESFF RHYYRDTPQT WDTLLKPYGF HSSDITDVVL THLHFDHVGG ALEKKGDKIV
PTFSNARYWS NTRHWDWAVE PNPREKASFL KDNLFPLQES GQLYFVDTQN LPFEWMDFIF
VDGHTEQQML PLITTPAEKK ILYAADLLPS AGHIPMPYIM SYDVRPLVSM QEKERVFNQV
LAEDWTVFLE HDLSNACISL QQTEKGIRLN NVFQISDFN