Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1456 |
Symbol | |
ID | 4184012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1687513 |
End bp | 1690587 |
Gene Length | 3075 bp |
Protein Length | 1024 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071449 |
Product | hypothetical protein |
Protein accession | YP_678067 |
Protein GI | 110637860 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00611896 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0757666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TATTTTTACT CGCTTTATTT AGCATTTCAA TTTTTCATTC ATCTTTTTCG CAGGTTGCAA ATGATGAATG TACCGGCGCA CTTACGTTGA CGCCATCTTC CACTTGTACC CCAACAAGCG GAACCCTGAC AGGAGCAGGG ACAAGTACAC TGACAACTGC GTGCAATGGC TATGCAGATG TGTTCTACAA GTTTGTTGCG TCATCGGCTG CGGTTGATGT TACTGTAGTT CCGTCTTCTA CACTTGATGC TAAACTAAGC ATCTTGTCTG CATGCGGAAC ATCTGCAAGT CTTGTTTGTC AGGATAATGG CGGACAAGGC GGAACGGAGA AAGCTAAGGT TTCCACATTA ACGGTTGGTC AAACATATTA TATTAAAGTT TCAAGCTACA ATTCAACATT GTCGACACCA ACGTTTACAA TTTGTGTGCA AAATACAACA CGTCCTGCAA ATGATGAATG TAGTGCTGCA GTAACACTAA CACCTGCCAC AACGCCTGCT CCTTTTTCCG GAACATTGGC TGGATCAACA AGAACTACCG TTACAACTTC CTGTTCAGGA GACTTAGATG TGTTTTATAA ATTTGTAGCA ACTTCTACTT CTGCAGTTGT TGCTGTAACC CCATCAGCAA GTTTTAATCC ATTCGTGAGT TTATTTACTT CATGTGCCGG TTCTTATCTG GCATGTGTTG ATAATTCAGG TACTGGTTCG GTTGAATCCA TGTACTTAAC TAATTTAACA CTTGGTTCAA CATATTATTT AAAAGTAGCA AGCAACGAAC CTGCCACAGG AATTGTACCT GCTTTTACCA TTGCTGTTCA AAACCAAACA CCTGTAGCAG CACCTGCTAA TGATGAATGT GCGGGCGCTA CAACAATTAC AGCGTCAACA ACGTGTACAT CCATAAACGC AACCATTGCC GGCGCTACTA CCTCAACAGC AACGTCATCC TGCGTAGGCT ACAATGATGT GTTTTTTAAG TTTGTGGCAA CATCTGCTTC TGCAGACATT ACAGTAACAC CAAGTGCAGG GCTTAATCCT GCGGTTAGTT TGTTTTCAGC TTGTGGCGGT ACTGCTTTGT ATTGTGGTAA CGATAATTAT ACCGGATATG CAGAAACTAT TCAAAGCAAT GGATTGGTTC CTGGAAATAC CTATTACATA AAAGTTGCCA GTTATGATTT TGCACCATAC AGTTCAACAT TCAGTGTCTG TGTTAAATCT GTTACACGTC CTGTAAATGA TGAGTGTACA GGAGCTATAA GCTTAACTCC TTCTACTACG TGTTCTCCGG TATCAGGTAC GTTAGCAGAT GCTTCAACTA CAACAACCAC TACTTCTTGT GGTGGAAATT ATGATGTGTT TTATAAATTT ACTGCAACAT CGCCGGCAGT TAAAATAACT GTAACACCAA CACTTAGTAC GTTAGATCTT GTCGTTGGTG TATTTTCAGG ATGCGGTACT TCGTCTCTTG ATTGTAAAGA TAATACAGCA AGTAATGATG TTGAAGTTGT TGATATGGAT GGGTTGATAA TCGGTAATAC GTATTACATT AAAGTTCAGG CATATTCCAG TACAGTAGCT GCTTCTACAT TCACAATTTG TGTTCAGAAT CAGGTTTCAC AGGCTCCTGC AAATGATGAA TGTACCGGAG CAATCGCATT AACCCCAAAT ACAGCATGTT CATCCGTTGC GGGTACAATT TATAAAGCAA CTACTTCTGC TGTTACAACA GGTTGTGGCG GTTATTATGA TGTGTTTTAT AAGTTTGTGG CAAATGCACC AACGGCTACC GTTAATGCTA CCGGATCTTC TGAAATAGAC ATGAAGCTTA GTGTATTCAG TGCGTGTGGC GGTACTTCTT TGGCATGCGT GGATAATACT TATTCCGGCG AAACAGAAAC TGTACAGTTA ACAGGATTAA CAGCAGGCAC AACGTATTAT ATTAAAGTTT CAGCTTTCAG TACTTCACCT CCTACATCGA CAAGCACATT TACAGTATGT GTTATAAGTA CTCCTGCAAC GGTTCCTGTA AATGATGAGT GTTCAGGAGC AATTACATTA ACACCATCAA CATCATGCAA CCCGGTTACC GGTACTTCGT TAAATGCAAC AAAGTCTACA ATAACAGCTT CTTCCTGCCA GACAGGAAAT AGTGATGTGT TTTATAAATT TGTTGCTACT TCAACGAATG CAGTTGTAAC GGTTGTTGGT TCATCCGGAT ATGATGCGGT TGTTTCTGCA CATAGCACAT GTGGCGGTGC TTATACAACA TGTATTGATA ATACGTCAAA CGGATCAACA GAAGTACTTG TCATGACAGG TTTAACTATT GGTAATACGT ATTATATTAA AGTTCAGCAA TACGGTTCTT CGTTGCCTGC TACACCAACA TTTACTATTT GTGTAACTAT TCCTCCGGCA AATGATGAGT GTGCAAACGC AGTTACATTA ACACAATCAT CAACATGCAT TAACACAACA GGTACATTTA ACGGTGCTAC AACTTCTGCT GTAGCAAACG GATGCAGTGG TAATTTAGAT GTATACTATA AATTTGTTGC GAACGCTACT ACAGCAACAA TAACAGCTGA TCCAGGGGCA GATGTAGATG TTATTTTAAG TGTTCTGGCG TCTTGTACAA GTACAACATC ATTAGCCTGC GTAGATGATA TGATTTCATC TACAACTACA GAAGTTGCTA ACGTAACAGG CTTGACAGTA GGCGGAACGT ATTATGTTAA AATTCAGAAT TACATTCAGG AAGTTCCTTC GAATGCTGCT TTTACAGTTT GTGTTAAAAA TACAGTAGCA ACAGGTCTGT CTGAAACAAA TGCATTGAAA TCCATTACAA TGTTCCCAAA CCCTGCACAA GGTATGGTGC ATATTGAAAA TGTTTCAGAA GTTACACAGA TTGAATTTAT GGATGTAACA GGTAAACCTG TATTTGTAAA AGAAATCACT GGTAATAGTT CATTAGACGT TTCCTCGTTG TCTGCAGGTG TATATATCGT GAAATTAACA ATGAACGGTG TTACAGAAAA CAGACGTTTG GTGGTAAGCA AATAA
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Protein sequence | MKKIFLLALF SISIFHSSFS QVANDECTGA LTLTPSSTCT PTSGTLTGAG TSTLTTACNG YADVFYKFVA SSAAVDVTVV PSSTLDAKLS ILSACGTSAS LVCQDNGGQG GTEKAKVSTL TVGQTYYIKV SSYNSTLSTP TFTICVQNTT RPANDECSAA VTLTPATTPA PFSGTLAGST RTTVTTSCSG DLDVFYKFVA TSTSAVVAVT PSASFNPFVS LFTSCAGSYL ACVDNSGTGS VESMYLTNLT LGSTYYLKVA SNEPATGIVP AFTIAVQNQT PVAAPANDEC AGATTITAST TCTSINATIA GATTSTATSS CVGYNDVFFK FVATSASADI TVTPSAGLNP AVSLFSACGG TALYCGNDNY TGYAETIQSN GLVPGNTYYI KVASYDFAPY SSTFSVCVKS VTRPVNDECT GAISLTPSTT CSPVSGTLAD ASTTTTTTSC GGNYDVFYKF TATSPAVKIT VTPTLSTLDL VVGVFSGCGT SSLDCKDNTA SNDVEVVDMD GLIIGNTYYI KVQAYSSTVA ASTFTICVQN QVSQAPANDE CTGAIALTPN TACSSVAGTI YKATTSAVTT GCGGYYDVFY KFVANAPTAT VNATGSSEID MKLSVFSACG GTSLACVDNT YSGETETVQL TGLTAGTTYY IKVSAFSTSP PTSTSTFTVC VISTPATVPV NDECSGAITL TPSTSCNPVT GTSLNATKST ITASSCQTGN SDVFYKFVAT STNAVVTVVG SSGYDAVVSA HSTCGGAYTT CIDNTSNGST EVLVMTGLTI GNTYYIKVQQ YGSSLPATPT FTICVTIPPA NDECANAVTL TQSSTCINTT GTFNGATTSA VANGCSGNLD VYYKFVANAT TATITADPGA DVDVILSVLA SCTSTTSLAC VDDMISSTTT EVANVTGLTV GGTYYVKIQN YIQEVPSNAA FTVCVKNTVA TGLSETNALK SITMFPNPAQ GMVHIENVSE VTQIEFMDVT GKPVFVKEIT GNSSLDVSSL SAGVYIVKLT MNGVTENRRL VVSK
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