Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1441 |
Symbol | |
ID | 4186238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1667491 |
End bp | 1667940 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638071434 |
Product | transposase |
Protein accession | YP_678052 |
Protein GI | 110637845 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0836409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAT CACTTTCACA GATGTATATA CATCTGATTT TTGGTACAAA AAATCGTTAT CCTTTTATTA TCGGCTCTGT TGAAACGGAA TTACATAAAT ACATTGCTGA AATATTAAAA AGTTATGAAT CTCCGGCAAT AAAAATAAAT TCTGTGCCGG ATCATATGCA CATACTCTTC CGGTTATCGA AAAACTATAC TTTAGTTAAA ATTATAGAAG AAATAAAAAA ACATTCTTCT AAATGGATGA AAAGTAAAGG TATTGATGGT TTTACGTGGC AAATTGGCTA TGGCGCATTC TCTGTAAGCA GTTCAAAAAT AGATACTGTT TCTAATTACA TTATGAATCA AAAGGAACAT CATAAAATTA TATCCTTTAA GGATGAAGTT GAAGGATTCA TGAAAAAATA TCACCTATGC GAATATGATC CGGAATATTT TTGGGTATAG
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Protein sequence | MGQSLSQMYI HLIFGTKNRY PFIIGSVETE LHKYIAEILK SYESPAIKIN SVPDHMHILF RLSKNYTLVK IIEEIKKHSS KWMKSKGIDG FTWQIGYGAF SVSSSKIDTV SNYIMNQKEH HKIISFKDEV EGFMKKYHLC EYDPEYFWV
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