Gene CHU_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1439 
Symbol 
ID4186236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1666379 
End bp1667161 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content34% 
IMG OID638071432 
Producthypothetical protein 
Protein accessionYP_678050 
Protein GI110637843 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0827394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.873384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT TATTTATTGT TGCTTGTGGT TATATTATTT ATAAGCTTGG CAGGTATTGC 
AAGGAAAATG AATATTACAT GGCCAGCCTG TTGATGTTGC AATATCATAA ATCCTTGAGT
GCAGAACGAC AACAAATACT TTATACCAAT TTTACGTATT ATAAAAAGTT ATCTGAAAAG
AAAAAACTTG AATTTGAAAA GCGTGTTCAG CATTTTTTAA CCAATAAATC GTTTATAGCT
TCTGATGGTT TTGAAATAAC AGAACAGATG AAAGTAATGA TTGCTGCTAC AGCTGTACAG
ATACTTTTTT GCCGTAAAGC ATATTACCTT TCATCCTTTG ATTTTATTGA GCTATTTGAA
GAAGTTCCGG TTCATGTAGA AGTTATGCGC AAAAAGCGCA TCATTCAGAT ATCATGGAAT
GAATTCAAAA AAGGATTTGA TTCGCTTATA GATGGCTACA ATCCCGGTTT GAAGATCATG
GCTATGGCTT TGGATCTGGA GCATAAATTC GGAGAGAAGT CTCTATTCAG TCAGCAAACA
TATAAAGCAT TTCAAAAAAT ATACAAGCAG GAAGCTGAAA AATATATTTT AAGCGGAAAA
TCCAAATACG ATCATTATAA TAAAGTAGAC CGTACGGAAT ATTTTGCTGT TGCTGTAGAA
TATTTCTTCG AGCGTCCGGA ACATTTTAAC GTAAATCAAC CTGCGATGTA TCTGGCATTA
TCCAAGCTGT TGAGACAGGA TCCGCTTGGG ATGTATACAT ATAAGGAGAA GGTATTTGAG
TAG
 
Protein sequence
MIKLFIVACG YIIYKLGRYC KENEYYMASL LMLQYHKSLS AERQQILYTN FTYYKKLSEK 
KKLEFEKRVQ HFLTNKSFIA SDGFEITEQM KVMIAATAVQ ILFCRKAYYL SSFDFIELFE
EVPVHVEVMR KKRIIQISWN EFKKGFDSLI DGYNPGLKIM AMALDLEHKF GEKSLFSQQT
YKAFQKIYKQ EAEKYILSGK SKYDHYNKVD RTEYFAVAVE YFFERPEHFN VNQPAMYLAL
SKLLRQDPLG MYTYKEKVFE