Gene CHU_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1406 
Symbol 
ID4185302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1629960 
End bp1630943 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content39% 
IMG OID638071399 
ProductDnaJ domain-containing protein 
Protein accessionYP_678017 
Protein GI110637810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.1294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.698693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTA TACAACACAT TCCTTCGGCA TCTTACAGTC CCGAGCAGCA AGAAATTAAT 
ACAAAGATCA AAGAAGTTAA AAACCTGCAG GAAGAACTAA AGCAGTTAAA TGTCTCCATC
CCTGAGGCAG TTACTGCGTA TCAAAAAGCA ATAGCTCCAA TTGCTGAAAA AATACGCTTG
CTTCAAAAAG AGAAAATCAT TGCGCTGGAT ATTTATGTGC ATGAAATTAA ATTCTCTAAA
AGAGAACTGC AGGAAATCGA CACCTATATG ACCGGCGAAA TAGAACAATG GCTATATGAA
AACGGTTCTG ACAGTGAGTT AGAGGATTTA TTTATCACCT ATGCACACAT GTCATTTGAA
GCCTACACCG AACAGTTCAG AAAAGAGGAA GATACTTTCA GTTTTCAAAA TCAGGTTACA
GATGAAGAAC CGTCATCTGA ATCGAAAAAG AAAACAGCTG CAGAGCGTAT GGCTGAGAAA
GAAAAAGTTA TTCAGGAGCA GCATCGGAAA AAATCCATCC GTGCCATTTA TATTGATCTG
ATAAAAGCAT TTCATCCGGA TACCGAACAG GATGCCGGGA AAAAAGCAGA GAAAGAAGAG
ATCAGTAAAA AGATTACGGA AGCTTATGGT AAAAATGATT TGTATGCATT ATTAAATCTT
GAAACCAAAT TTTTAGAGCA GCAGACCAAC CGTTTGAACG GCATGAAAGC AGAAACGGTA
AAAAGTTATG CAGCCATGCT CGATAACCAG ATCAAGGAGC TGAAGCAAAG CATCCGTGAC
TTTAAAAATC AGCACGACAC TATTTTTTTT GAGATGTGCA AGCCAAATGC CAAGCCTGAA
AAATACCTGC GTAAAGTAAA GAAAGAATTA CAGGAAGGCG TTCAGATCTT AAGCCGGCAG
ATCATGATTC TGCAGCATGT AGATCCGGGT ATTAAATCAG ATCTATTATT TGAAATGGAG
CGGCAGAACA GCCGCAGACG ATAA
 
Protein sequence
MSSIQHIPSA SYSPEQQEIN TKIKEVKNLQ EELKQLNVSI PEAVTAYQKA IAPIAEKIRL 
LQKEKIIALD IYVHEIKFSK RELQEIDTYM TGEIEQWLYE NGSDSELEDL FITYAHMSFE
AYTEQFRKEE DTFSFQNQVT DEEPSSESKK KTAAERMAEK EKVIQEQHRK KSIRAIYIDL
IKAFHPDTEQ DAGKKAEKEE ISKKITEAYG KNDLYALLNL ETKFLEQQTN RLNGMKAETV
KSYAAMLDNQ IKELKQSIRD FKNQHDTIFF EMCKPNAKPE KYLRKVKKEL QEGVQILSRQ
IMILQHVDPG IKSDLLFEME RQNSRRR