Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1402 |
Symbol | |
ID | 4185298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1625406 |
End bp | 1626287 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071395 |
Product | hypothetical protein |
Protein accession | YP_678013 |
Protein GI | 110637806 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.299884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.40578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCG GAAAAACAGA TACTCCTGAA GATATTGATT TTACGTTACC TAAAGATCAT CCGGACACTA AAAAGATTCT CTCGGAAGCA AAGCCCGGCA AGCATTTTAA CGTGTATGTA GGTTGTGCTA AATGGAACAA AACCGATCTG AAAAACTTTT ACCCAAAAGG CACAAAAGAC GAACTGCAGT ATTATGCGAC GCAGTTTAAC AGCATAGAAC TGAATGCTAC GTTTTATAAG TCTCCCTCTA AAGATCAGGT GCAGACATGG AAAGCGAAAG CAGCCAAAGG ATTTAAATTC TTCCCTAAAA TACCCAATAC CATCAGTCAT TTTAAGCGGT TGGTTGGCGT AGAAACAATC GTGGAGGAAT TTTGCGATGC GGTTGTGTTG TTTGAAGAAA ATCTCGGTAT GAGCTTTTTA CAGATGCACG ATAACTTCAA ACCAAAAGAT ATGGATAAGC TTGATGCGTT CCTGAAAAAG TTTCCGGCTT CTGTACCTTT AGCTGTAGAG CTGCGAAACG AAGAATGGTA TTCGGATAAA AACGTACAGG ATGATCTGCA CGCGATGCTG GTTAAATATA AAAAGACATT TGTGCTTGTT GATACTGCCG CGCGCAGAGA TATCATGCAC ATGCGCTTAA CGTCAGATAA AGCATTTATA CGTTATGTAG GAGCTAATCA CGAAAGCGAT TATGCGCGGC TGGATGATTG GATCAAACGT ATTAAAACCT GGCGTAAAGA AGGATTAAAC GAACTATATT TCTTTGTACA CCAGAATGTA GAACTGGAAT CACCCTTGCT TTCTGCTTAT TTTATTGAAA AAATGAATAA GGAATTTGAT CTGGATTTAA CTGTTCCGCA AACAATAAAA AAGAAACAGT AG
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Protein sequence | MQFGKTDTPE DIDFTLPKDH PDTKKILSEA KPGKHFNVYV GCAKWNKTDL KNFYPKGTKD ELQYYATQFN SIELNATFYK SPSKDQVQTW KAKAAKGFKF FPKIPNTISH FKRLVGVETI VEEFCDAVVL FEENLGMSFL QMHDNFKPKD MDKLDAFLKK FPASVPLAVE LRNEEWYSDK NVQDDLHAML VKYKKTFVLV DTAARRDIMH MRLTSDKAFI RYVGANHESD YARLDDWIKR IKTWRKEGLN ELYFFVHQNV ELESPLLSAY FIEKMNKEFD LDLTVPQTIK KKQ
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