Gene CHU_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1402 
Symbol 
ID4185298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1625406 
End bp1626287 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content39% 
IMG OID638071395 
Producthypothetical protein 
Protein accessionYP_678013 
Protein GI110637806 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.299884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.40578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCG GAAAAACAGA TACTCCTGAA GATATTGATT TTACGTTACC TAAAGATCAT 
CCGGACACTA AAAAGATTCT CTCGGAAGCA AAGCCCGGCA AGCATTTTAA CGTGTATGTA
GGTTGTGCTA AATGGAACAA AACCGATCTG AAAAACTTTT ACCCAAAAGG CACAAAAGAC
GAACTGCAGT ATTATGCGAC GCAGTTTAAC AGCATAGAAC TGAATGCTAC GTTTTATAAG
TCTCCCTCTA AAGATCAGGT GCAGACATGG AAAGCGAAAG CAGCCAAAGG ATTTAAATTC
TTCCCTAAAA TACCCAATAC CATCAGTCAT TTTAAGCGGT TGGTTGGCGT AGAAACAATC
GTGGAGGAAT TTTGCGATGC GGTTGTGTTG TTTGAAGAAA ATCTCGGTAT GAGCTTTTTA
CAGATGCACG ATAACTTCAA ACCAAAAGAT ATGGATAAGC TTGATGCGTT CCTGAAAAAG
TTTCCGGCTT CTGTACCTTT AGCTGTAGAG CTGCGAAACG AAGAATGGTA TTCGGATAAA
AACGTACAGG ATGATCTGCA CGCGATGCTG GTTAAATATA AAAAGACATT TGTGCTTGTT
GATACTGCCG CGCGCAGAGA TATCATGCAC ATGCGCTTAA CGTCAGATAA AGCATTTATA
CGTTATGTAG GAGCTAATCA CGAAAGCGAT TATGCGCGGC TGGATGATTG GATCAAACGT
ATTAAAACCT GGCGTAAAGA AGGATTAAAC GAACTATATT TCTTTGTACA CCAGAATGTA
GAACTGGAAT CACCCTTGCT TTCTGCTTAT TTTATTGAAA AAATGAATAA GGAATTTGAT
CTGGATTTAA CTGTTCCGCA AACAATAAAA AAGAAACAGT AG
 
Protein sequence
MQFGKTDTPE DIDFTLPKDH PDTKKILSEA KPGKHFNVYV GCAKWNKTDL KNFYPKGTKD 
ELQYYATQFN SIELNATFYK SPSKDQVQTW KAKAAKGFKF FPKIPNTISH FKRLVGVETI
VEEFCDAVVL FEENLGMSFL QMHDNFKPKD MDKLDAFLKK FPASVPLAVE LRNEEWYSDK
NVQDDLHAML VKYKKTFVLV DTAARRDIMH MRLTSDKAFI RYVGANHESD YARLDDWIKR
IKTWRKEGLN ELYFFVHQNV ELESPLLSAY FIEKMNKEFD LDLTVPQTIK KKQ