Gene CHU_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1381 
Symbol 
ID4185454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1604236 
End bp1604781 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID638071375 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_677993 
Protein GI110637786 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.186905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.991286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA TAAAAATAGA AGAAAAACCA GACGGACTGG AAGGTCCGGG TTTCTTTGCC 
ACATCATTAG ATTCAGTAAT CGGTTTAGCA CGGAAAAACT CTTTGTGGCC GCTACCGTTT
GCAACGTCTT GTTGCGGAAT TGAATTCATG GCTACAATGG CATCTACATA CGACATTGCG
CGTTTTGGTG CTGAACGTCC AAGCTTCTCT CCCCGTCAGG CGGATGTCTT GTTAGTAATG
GGAACCATTG CAAAAAAAAT GGGTCCGGTA CTTCGTCATG TGTACGAACA GATGGCAGAA
CCAAAATGGG TTGTAGCGGT TGGTGCCTGT GCATCAAGCG GTGGTATCTT CGACACCTAC
AGCGTACTTC AGGGCATCGA CAGAATTATT CCGGTGGATG TGTATGTTCC GGGCTGTCCC
CCACGTCCTG AACAGATTAT ACAAGGCTTA ATGCGTGTGC AGGATCTGGC ATCAACGGAA
TCACTTCGCA GACGCGAATC TCCTGAATAC AAAGCATTAC TTGCTAAATA CGAGATTGAA
GAATAA
 
Protein sequence
MSDIKIEEKP DGLEGPGFFA TSLDSVIGLA RKNSLWPLPF ATSCCGIEFM ATMASTYDIA 
RFGAERPSFS PRQADVLLVM GTIAKKMGPV LRHVYEQMAE PKWVVAVGAC ASSGGIFDTY
SVLQGIDRII PVDVYVPGCP PRPEQIIQGL MRVQDLASTE SLRRRESPEY KALLAKYEIE
E