| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1302 |
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| Symbol | pabC |
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| ID | 4184865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1514465 |
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| End bp | 1515283 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071296 |
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| Product | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase |
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| Protein accession | YP_677914 |
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| Protein GI | 110637707 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0291575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.892224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATAT ATTCAAACGG ACAATTTATA CCGGATTCAG AAGCGCTCTT TACTATAGAC
AATAGAGCCT TCCAATACGG AGATGGTGTC TTTGAAACAA TGCTTTATAA AAATAACAGC
ATTCGATATT TTTCAGATCA CTTCTCCAGG CTGCAAAAAT CGATGGCCTG CATGGAACTT
ACCAATGAGA TCTGCTCCAA CGAAACGGAA TTGGAAAACA TCATTCATGA ACTCATTAAG
AAGAACGGAT ACGGAGCTGA CGTTCGCATC AAATTAATGG TGCATAGAAA CTGGGGTGGT
TTGTATGCGC CTGAATCTAC GAATGGTATT CTAACGGTTT TGGTAAAAGA ACACATCGCC
TCCAATCAGA TAAGCAAAGA ATATGTAGTC TTTTCGGACG ATGTGCGTAA TCACTACTAT
AAAGGCTCTA TGTATAAATT GCTGAGTTCG GGCAGGTATG TACTGGCAGG ACTTGAAATG
AAGCGCCGTA AAGCAAACGA CATTATCATT ACAGATATTG ACGGCAATGT AAGCGAATGC
CTTCAGGCAA ATCTGTTCTG GATCAAAAAC AATACAATCT ATACGCCGGG AATTGAAACA
GGCTGCATTG ACGGCGTTAT GCGCAAGCAA ATTCAGCAGT ATTGTGCTGT AACTAATATT
GAATTCAAAA CCGGATTTTA CAACATCACC GAATTAGAGA AGTCTGATAT CGTATTCGCA
GGAAATGTTG CGGGTCTTAC TCCTTTTGCA CAAATAGAAA AAGTAAAATT CAGAACAGAA
CACGAATTGT TTGATAAGCT TAAAAAGCAC TTGACATAA
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| Protein sequence | MIIYSNGQFI PDSEALFTID NRAFQYGDGV FETMLYKNNS IRYFSDHFSR LQKSMACMEL
TNEICSNETE LENIIHELIK KNGYGADVRI KLMVHRNWGG LYAPESTNGI LTVLVKEHIA
SNQISKEYVV FSDDVRNHYY KGSMYKLLSS GRYVLAGLEM KRRKANDIII TDIDGNVSEC
LQANLFWIKN NTIYTPGIET GCIDGVMRKQ IQQYCAVTNI EFKTGFYNIT ELEKSDIVFA
GNVAGLTPFA QIEKVKFRTE HELFDKLKKH LT
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