| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1292 |
|---|
| Symbol | |
|---|
| ID | 4184855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1506412 |
|---|
| End bp | 1507011 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638071285 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677903 |
|---|
| Protein GI | 110637697 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00634869 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.479491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCCTTGATCA CATAAAGAGA ATAGAACACG GCTTTAAACA TATTTTTGAA
GCCGGCAACA CTATTTTAGC TGACGAAAAA CAAAAACATT TGGACCTTGC AACAAGTTTT
TTAGATGACG ATAGTTATCA AGTCAGAATG TTAGCAACAT ATATCTTAGG ACATCTTTCA
ACAAATAACC AAAAAGCGCT TAAACTTCTT AAAACAAAAG TTGCAGACGA TAAGGATTGG
AGAGTTCAGG AAATGTTAGC CAAAGCGTTT GACTATTATT GTATGACAAT TGGATATGAA
AAGAGCCTGC CAACTATTAA CAAGTGGTTA GAAGATAAAA ATCCAAATGT AAAAAGAGCG
GTTGTTGAAG GACTTCGCAT ATGGACAAGC CGACCTTATT TTCGGGATAA TCCGACAGTT
GCAATACATT TAATTAGCGC GCATAAGTCC GATGACAGTG AATATCTGCG TAAATCAGTG
GGCAATGCAC TTCGGGATAT TGGTAAAAAG TATAAAGACG ACATAATAAA TGAAATCTCA
CAATGGGATT TGACAAATAA AAAAACAGCG TTTACTTATA AACTGGCGAA AGGGAAATAA
|
|---|
| Protein sequence | MKKLLDHIKR IEHGFKHIFE AGNTILADEK QKHLDLATSF LDDDSYQVRM LATYILGHLS
TNNQKALKLL KTKVADDKDW RVQEMLAKAF DYYCMTIGYE KSLPTINKWL EDKNPNVKRA
VVEGLRIWTS RPYFRDNPTV AIHLISAHKS DDSEYLRKSV GNALRDIGKK YKDDIINEIS
QWDLTNKKTA FTYKLAKGK
|
|---|
| |