| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1239 |
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| Symbol | |
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| ID | 4187029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1438726 |
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| End bp | 1442970 |
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| Gene Length | 4245 bp |
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| Protein Length | 1414 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638071233 |
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| Product | bifunctional acetylxylan esterase/xylanase, CBM4 module, glycoside hydrolase family 10 protein and carbohydrate esterase family 6 protein |
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| Protein accession | YP_677851 |
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| Protein GI | 110637644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.830301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATA GATTTATTGC CGCATTCTTC TGGGCTTTTT TTACATGGGT GTTAACGCCT
CAGGCTTTTT CACAGGACCC CAATTTTCAT ATTTACCTTT GCTTCGGGCA ATCGAATATG
GAAGGGCAGG GACCGATTGA AGCGCAGGAC CAGACTGTTG ACAGCCGTTT CCGCGTGATG
CAGGCAGTAA GCTGCACGGG TCAGCCTCAG AATGCCTGGC GGACAGCAAC GCCGCCTATT
GCGCGATGTA ATACCAAAAT AGGGCCATCG GATTATTTTG GCCGTGAAAT GGTTAAAAAT
TTACCGGCGA ATATAAAAGT TGGTATTGTA CATGTGTCTG TGGCAGGTTG TAAAATTGAA
CTGTTTGATA AAACAAATTA CAATACCTAT CTGAATAGTC TTTCATCCGC AGATCAATAC
ATTAAAACAA CTGCCGGTCA ATACGGTGGT AATCCGTATG GCCGTTTGGT TGAACTGGCA
AAACTTGCAC AGAAAGATGG TGTGATCAAA GGGATTCTGC TGCATCAGGG AGAGTCTAAT
ACAGGTGATC AGGCCTGGGC TACTAAAGTA AATAATGTAT ATAAAAATCT TCTTGCAGAT
CTTGGCCTTA CCGCAGCGAA TGTTCCGCTA TTAGCCGGAC AGGTTGTTGA TGCGGCACAG
GGCGGTCTTT GTGCCAGTAT GAATACAACC ATAAATGCGT TGCCGAATAC CATACCAACA
GCACATGTCA TTTCTTCCAG CGGTTGTACC GATCAGTCAG ATAATTTACA TTTCACAACA
GCAGGATATA GATTGCTTGG AACAAGATAT GCGCAAACCA TGCTTTCCCT TCTGAATATA
ACTGCAGCGG CAGCCCCGGT AGTAACATTA ACGGCACCAA CAGCAACCAG CTTTACAGCG
CCTGCAAGTA TTACCATTAC CGCAACCGCA ACCGATGCAG ATGGAACAAT TTCAGCTGTG
AAATTCTATA ACGGTAGCAC CTTATTAAGT ACGGTAACAA CTTCTCCATA TACATACAGC
TGGACAAATG TTGGAGCAGG GACATACAGT ATTACCGCGG TTGCAACGGA TAACTCCGGC
AGCAGCACAA CTTCAACGGC TAAAAGTGTT ACGGTAACAA CTACTACATC AACAACTAAC
CCGATCGGGA AATGTAAAGG AAAATATTTC GGAAACATTA TTGCAAACAG TGTTCCTTCT
ACCTATACTA CATACTGGAA CCAGGTAACT TCAGAGAACT CCTCTAAATG GGGATCTGTA
GAAAATACAC AAGGTACCTA TAACTGGACA GGTTCAGATC TGGCTTACAA CTGGGCAAAA
AATAACGGCG GTTTATTCAA ATACCACGCG TTTGTATGGG GTCAGCAGGC GCCCGGCTGG
GTGTCAACAG CATCAGCAGC TACAATCACA GCGGCTGTAC AGAATTATAT CAAAGCATGT
TCTACACACT ATGCGCCAAT GGGCGGGCTT AAAATGATCG ATGTGCTGAA TGAGCCCGTA
AACACAGCGA TGCCTGGTAA TATGAAGGCA GCACTTACAG CCGGTTACAA AGCTGAGCCA
GCAAATGCCA ACGATCTGAA CAACCCGTAC GGATGGGTGA TCTGGCCGTT CCAGCTTGCG
CGTAAATATT TTCCGGATGC GGTATTGCTG ATCAACGAAT ACAATGTTGA GATGAACTGG
AACAACTGCA GAGCTCCGTA TCTGGAAATG GCCAATGCGG TAAAGAATGC CCCAAACCTT
ACGGACGGAA AGAAAAACCT GATTGATGGG GTAGGCTTGC AATGCCATGG CATTGATAAT
CTGACGGCAG CAAACTTTAA AGCCTGTATT GACGAGATCT GGACTAAAAC CGGATTGCCG
ACACACATTA CAGAATTTGA TCAGCAGGCA GATCCGAATG AAGCGAAACA AACGTCTGTA
TATTCTTCTT TAATACCTGT AGCCTGGGAG CACCCGCACG TAGCAGGGAT CACACTTTGG
GGATACATAC AGGGAACTAC CTGGAGAAAC GGTAACGGCA CGTCCGGCGC AAACGGTACA
GATTCAGGTA TCATGTATGC AAATGGCACA CCACGTCCGG CACTGACCTG GCTGATAAAC
TATATGGCGG GGAAGCCAAG TCTGTCGTGC TGTCCGGCAC CGTTCCCGTT TGCAGACTGT
TCAAGCGGCA GCAGCCCGGT AGTAAGCCTT ACTGCTCCGG TAAACAATGC GACGTATGCG
GCAGGGGCCA CTGTTACATT AACTGCTGCG GCAACCGATG CCGATGGTAC GATTTCTAAC
GTAGAATTTT ATAGCGGTAC AACTTTATTG GGAAGTAAAA CAACAGCGCC GTATTCTTAT
AGCTGGGCTA CTGTTGCTGA AGGCGTTTAC ACAATTACAG CCGTGGCTAC GGATAATTCA
GGCAACAAAA CCACTTCCAC TGCCATAACA ATCACCGTTG GTAATCCTAA AAAAGAATTG
ATCAACAATG GCGAATTTGA TAGCGGAACA ACTGGCTGGA CTTTGCAGAA CAATAATAAT
GCAACAGGCA CCATGTCGGT TGTAACCAAT GGAAATTTAT CCGGCACCAA TTCATTACGT
GTGTGTCCTT CTTCAAATCC GGGTACTATT GAATGGCATG TGCAGGTAAG CCAGACAACA
CCGGTTGTTG CAGGTAAAAC CTATCAGATA AGCTTTATGG CTAAGGCAGA TGCTGCCCGA
CAGATGTCTG TGAACCTGCA GGAACTTGCA AGCCCTTATA CAACCTATTT TTCACAGACA
ATTGATCTTA CAACAGCTGC ACAGACATTT AGCTTTACGT ATACAGCAGA TGTAACAGAT
GCAACCGCGC TGATGAAATT TTATGCAGGT GCAAACAGCA TCTGTCTGAA TATAGATAAG
GTATCTATGA CTGAAGGCAA CTTTGTCCTT ACGCCAGTAA TTACACCGGC AGGTTTAACA
ACGTTCTGTA CAGGCGGCAA CGTTATTCTG AATGCAAATA CCGGTACCGG ATATACCTAT
CAATGGAAAA AAGATGCAGC CGATATTACG GGAGCTACCG CTGCAGCTTA TACAGCAACG
CAATCCGGAA GTTATACCGT AACCATTACG GCAAACGGCC AGACAGCAAC TGCTCCGGCT
GTTGCTGTAA CCGTAAACGC TTTACCCGCT GCACCTGCCG TTACAACACC TGTTACCTAT
TGCGTAAATG CAACAGCTGT ACCGGTAACG GCTGCAGGCA CCGCCCTGAA ATGGTATGAT
GCTGCAACAG GCGGGACAGT GGTAACCGCA CTGACACCAT CTACATCGGC TGCTGGTACT
ACAAATTATT ATGCATCGCA AACTGTAAAC GGATGTGAAA GCTCAAGAGC AACTCTGGTG
GTAATTGTAA ATGCCCTACC AGCGGCTGCA ATTACTGCCG CAGGGGCCAC AAACATCTGC
CAGGGAAATT CAGTGATACT TACAGCCTCA GCGGGTACTT CTTATATCTG GAAAAACGGG
AATACGCAGG TTGGTACTAC GGCAAGTTAT ACAGCCACAG CAGCTGGTTC GTATACGGTA
GAAGTTACAA ATGCTGGCGG TTGTAAAGCT GTTTCACCAG TAACTACGGT TGCTGTAACC
AGTATACCAG CGGCAACAAT CACCGCAACA GGTTCAACAA CATTCTGTCA GGGTGGTTCG
GTACTGCTTA CGGCCTCAGC GGGTAGTTCT TATATCTGGA AAAACGGCAA TACACAGGTT
GGTACTGCGG CAAGTTATAC AGCAACAACA GCAGGTTCAT ACACCGTGGA AGTTACCGGT
TCAGGAAACT GCAAAGGAAC GTCCGGAACA ACAACGGTTA CGGTAACGAT TCCGACAATC
TGGTTTGCGG ATACAGATAA TGATGGTTTA GGTGATGCTG AAAACACACG TGCAGCCTGT
GAAAAACCTG CCGGATACGT TTCAACAGCC GGAGATTTAT GTCCTGCCGA CCCTGCCAAA
ACAGTTCCGG GAACATGTGG CTGCGGGCTG CCGGAAACCG ATTGTATTTC AACAGATATA
GACTTTTCTT CGGTTCAACA GGATTTTATG CTATTCCCGA ATCCTGTAAC GCTTCAGACC
TTATATTTCT CTGAAAGCAT CAGCGGAACG GTATACGATT CAAAAGGATC GCTGGTATTT
TCATTTACAG AACTGGAATC CATTGATACA GGCATATTGG AAAATGGATT GTATCTGATC
TATACAAAAA CAGGTGATAC CTATAAGTTT TTGGTTTCCA GATAG
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| Protein sequence | MKHRFIAAFF WAFFTWVLTP QAFSQDPNFH IYLCFGQSNM EGQGPIEAQD QTVDSRFRVM
QAVSCTGQPQ NAWRTATPPI ARCNTKIGPS DYFGREMVKN LPANIKVGIV HVSVAGCKIE
LFDKTNYNTY LNSLSSADQY IKTTAGQYGG NPYGRLVELA KLAQKDGVIK GILLHQGESN
TGDQAWATKV NNVYKNLLAD LGLTAANVPL LAGQVVDAAQ GGLCASMNTT INALPNTIPT
AHVISSSGCT DQSDNLHFTT AGYRLLGTRY AQTMLSLLNI TAAAAPVVTL TAPTATSFTA
PASITITATA TDADGTISAV KFYNGSTLLS TVTTSPYTYS WTNVGAGTYS ITAVATDNSG
SSTTSTAKSV TVTTTTSTTN PIGKCKGKYF GNIIANSVPS TYTTYWNQVT SENSSKWGSV
ENTQGTYNWT GSDLAYNWAK NNGGLFKYHA FVWGQQAPGW VSTASAATIT AAVQNYIKAC
STHYAPMGGL KMIDVLNEPV NTAMPGNMKA ALTAGYKAEP ANANDLNNPY GWVIWPFQLA
RKYFPDAVLL INEYNVEMNW NNCRAPYLEM ANAVKNAPNL TDGKKNLIDG VGLQCHGIDN
LTAANFKACI DEIWTKTGLP THITEFDQQA DPNEAKQTSV YSSLIPVAWE HPHVAGITLW
GYIQGTTWRN GNGTSGANGT DSGIMYANGT PRPALTWLIN YMAGKPSLSC CPAPFPFADC
SSGSSPVVSL TAPVNNATYA AGATVTLTAA ATDADGTISN VEFYSGTTLL GSKTTAPYSY
SWATVAEGVY TITAVATDNS GNKTTSTAIT ITVGNPKKEL INNGEFDSGT TGWTLQNNNN
ATGTMSVVTN GNLSGTNSLR VCPSSNPGTI EWHVQVSQTT PVVAGKTYQI SFMAKADAAR
QMSVNLQELA SPYTTYFSQT IDLTTAAQTF SFTYTADVTD ATALMKFYAG ANSICLNIDK
VSMTEGNFVL TPVITPAGLT TFCTGGNVIL NANTGTGYTY QWKKDAADIT GATAAAYTAT
QSGSYTVTIT ANGQTATAPA VAVTVNALPA APAVTTPVTY CVNATAVPVT AAGTALKWYD
AATGGTVVTA LTPSTSAAGT TNYYASQTVN GCESSRATLV VIVNALPAAA ITAAGATNIC
QGNSVILTAS AGTSYIWKNG NTQVGTTASY TATAAGSYTV EVTNAGGCKA VSPVTTVAVT
SIPAATITAT GSTTFCQGGS VLLTASAGSS YIWKNGNTQV GTAASYTATT AGSYTVEVTG
SGNCKGTSGT TTVTVTIPTI WFADTDNDGL GDAENTRAAC EKPAGYVSTA GDLCPADPAK
TVPGTCGCGL PETDCISTDI DFSSVQQDFM LFPNPVTLQT LYFSESISGT VYDSKGSLVF
SFTELESIDT GILENGLYLI YTKTGDTYKF LVSR
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