| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1196 |
|---|
| Symbol | |
|---|
| ID | 4185351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1374940 |
|---|
| End bp | 1375989 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638071193 |
|---|
| Product | b-glycosyltransferase |
|---|
| Protein accession | YP_677811 |
|---|
| Protein GI | 110637604 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.959593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGTTG CTTATCTGTT GCTGCTTCTA TGTTCCATTC CGTTCAGAAA AACCTTACCG
GAAACCATTT CCAGCGAAGG TGTAACCGTT CTGATTGCTG CACACAATGA ACGTGAGAAC
CTGAGTCAGT TTCTTCCTTC TGTCTTAAAC CAATCCTATC CGCTTTTTGA AATCATTGTA
GTGTGCGACC GCTGTACTGA CGGCACTGTT TCTTATCTTA AATCATTATC TAATAAAAAC
TTACGAATCA TTGAAGTAAA CGGGAAAACC CAAGGTGTTC ACCCTAAAAA GGCTGCCCTG
CAGACCGGCA TAAAAGCTGC CCGGTATGAC TGGATTTTGC TAACCGACGC TGATTGCCGG
GCTGCCAGCG ATGGCTGGAT CAGCGGAATG ATGGCCGCCA AAGAAGACAA AGCCATCTGT
CTGGGTATTT CCATGTATGA AAAAAGACCA GGCTTTTTGA ATACGTTCAT TCAGTTTGAG
ACCTTATTTA CCGCATTTCA ATATACAGGC TGGGCCATTT TAGGCAAACC ATACATGGCT
GTCGGGAGAA ATTTGTTGTA TTCAAAGCAA CTATTTATCA ACACTGGCGG CTTTGGAAAA
TATGGGGGCC ATCTTGGCGG AGATGATGAT CTGTTGATAC AGCGGCTGGC GACGGGAAGG
AATACAACAG TTTGTATTAA TACCGAAAGT TTCACGCTTA GCAGGCCAGC AGAAGGATTC
AGCGTTTGGT GGCGACAGAA ACACCGCCAT CTGCATGCGG GGAAAAAATA CCCAATTGGG
GTATTGATTA ACTTATGTAT ATACCCCGTT TGCAGTACAA TCTTCTACGC CGGAATCATT
TATTCGGGCA TATCCTTCAA TTTTGCTGAG ATAATGCTCT TTTATATTTT GAGAACATGT
ATATTTATAA GTATTTTTGT GTGTATGGGT CGGAAGTGGA ATGTACCTGT TTCAATCTTC
TTTCTTCCCA TTGCTGAAAT AGTCTATTTG ATTTATCTAC TATTCGCTGG TTTATATAAC
ACAGCAGTAC CTATTAAGAA ATGGAAGTAA
|
|---|
| Protein sequence | MSVAYLLLLL CSIPFRKTLP ETISSEGVTV LIAAHNEREN LSQFLPSVLN QSYPLFEIIV
VCDRCTDGTV SYLKSLSNKN LRIIEVNGKT QGVHPKKAAL QTGIKAARYD WILLTDADCR
AASDGWISGM MAAKEDKAIC LGISMYEKRP GFLNTFIQFE TLFTAFQYTG WAILGKPYMA
VGRNLLYSKQ LFINTGGFGK YGGHLGGDDD LLIQRLATGR NTTVCINTES FTLSRPAEGF
SVWWRQKHRH LHAGKKYPIG VLINLCIYPV CSTIFYAGII YSGISFNFAE IMLFYILRTC
IFISIFVCMG RKWNVPVSIF FLPIAEIVYL IYLLFAGLYN TAVPIKKWK
|
|---|
| |