Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1167 |
Symbol | |
ID | 4184539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1348711 |
End bp | 1350477 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638071164 |
Product | hypothetical protein |
Protein accession | YP_677782 |
Protein GI | 110637575 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.233122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0121867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACATCA ATAAGACGAG AATTTGTCTG TTACTCATAT CTGCACTACA ATTTATAGGC ATTGCATCCG CGCAAAACTA TTTATTTGAA CGGAAACTAA GCGGCTATAA AAATTCCAGA ATAGCACCGG TATTCATCAG TCCGCTGGGT ATTGTTGTTG ACTCCGTGAA TAACGTGTAC GTGTCTGATA TTGACCGGGT ACAAAAGTTT GACGCAAAAG GAACGCTGTT GAAAAAATGG GGGCGCTTTG GTTTTGGCGA AGGACAGTTT TCAGATGCAT CCCGCATGGC CATTGATAAG CAGGGTTTTT TATATGTGCT TGACGGGTTC CGTGTTCAGA AAATGACACT GGATGGACAG TTTGTTACTA AATGGGGAAG ATACGGAACA CATGAAGGGG AGTTTTCTTT TTTAACAGGC ATTGCTATTG ACAGCATGAA CAATATTTAT GTTACAGACC GTGCCAATCA CTGCGTACAG AAATTTACCA GCGATGGTGT CTTTCTGAAA AAATGGGGTG TGCTGGGTAA AGAACCCGGG CAGCTGAATG AGCCGGAAGA TATTGTGATC GATACATACG GCTTTCTCTA CATTGCCGAT GCCAGCAATC ACCGCATTCA GAAGTTTAAC GGCGACGGTG AAATGGTCGC TTCCTGGGGT TCATACGGCG AAGGTAAAGG CCAGTTCAAT TACCCGAACG GATTAGCGAT TGATAAAAAA AATCACCTGT TTGTTGTTGA CTATAACAAC ACGCGTATTC AGGAACTTTC AAACACAGGT GTATTTATAG CGAAGTGGGG AAAGATCGGC GATAAACCAA ATCACTTTAA CGCCATTACA GGCATTGCTC TGGATGCCTC TGATAATATT TATACCGTTG AAGCAGGCAA TCAGCGCGTA CAGAAATTTA CAAACCAGGG GCATTATGTG TTGCTGTGGG GCAATCCGCT TGGACAGAAT GAACAGTTCT ATTTTCCTTT TAATGTGGTA CTCGACAGGG CAAACAACGT ATATGTAATG GATATTAATT ACATACAGAA ATTTTCACCT ACCGGAGATT TTATACAGAA GTGGGGCAAC ATAGGTTCCT GGAACAATAC GTATGGCAAC CTTGCAGACT TTGCCATTGA CCATGCAGGC AATGTGTACA TTGCAGACGA TCAGAAACAC TGTATTATGA AATTCTCGCC GGATGGACAA ATGATTTCTA CCTGGGGGAA TTACGGCTCA GGCAACGGAC AGTTTAATGA CCCCATTGCA CTGGCTATTG ATGGAGATGA TAATATTTAT GTAGTAGACA GAGATAATCA CCGGGTACAG AAGTTTAACA GCAACGGCGA CTTCCTTTCT AAATGGGGGC AGCAGGGCAC GGGCGCAAGT CATTTCTCCT GGCTGGCAGA TATTGCCATT GATGCAAAAG GAGATATTTA TATTGTAGAC TCTCAAACCA GAGAAGTGCA GAAGTTTACC AATACAGGTG AGTTTATTAC CAAGTGGGGC GGACAGGGCA CTACAAACGG AAAGTTTTTA ACGCCGATTG GTATTGGTGC TTGTCCGGCA GGGGATATTT ATGTATCTGA CCTGGAAAGA AACTGCATAC AGAAGTTTTC AAATACAGGA ACGTTCATTA CAGTGATCGG CGGACCCGGT ATTGACGATG GTCAGTTCCA AAGCCCGCGC GGCGTAGCAA TCGATTCGTT CGGCAGCCTG TACATTGCAG ACGCCGATAA TAACTGCGTA CAGAAATTCG CCCCCGTACA TAAATAA
|
Protein sequence | MYINKTRICL LLISALQFIG IASAQNYLFE RKLSGYKNSR IAPVFISPLG IVVDSVNNVY VSDIDRVQKF DAKGTLLKKW GRFGFGEGQF SDASRMAIDK QGFLYVLDGF RVQKMTLDGQ FVTKWGRYGT HEGEFSFLTG IAIDSMNNIY VTDRANHCVQ KFTSDGVFLK KWGVLGKEPG QLNEPEDIVI DTYGFLYIAD ASNHRIQKFN GDGEMVASWG SYGEGKGQFN YPNGLAIDKK NHLFVVDYNN TRIQELSNTG VFIAKWGKIG DKPNHFNAIT GIALDASDNI YTVEAGNQRV QKFTNQGHYV LLWGNPLGQN EQFYFPFNVV LDRANNVYVM DINYIQKFSP TGDFIQKWGN IGSWNNTYGN LADFAIDHAG NVYIADDQKH CIMKFSPDGQ MISTWGNYGS GNGQFNDPIA LAIDGDDNIY VVDRDNHRVQ KFNSNGDFLS KWGQQGTGAS HFSWLADIAI DAKGDIYIVD SQTREVQKFT NTGEFITKWG GQGTTNGKFL TPIGIGACPA GDIYVSDLER NCIQKFSNTG TFITVIGGPG IDDGQFQSPR GVAIDSFGSL YIADADNNCV QKFAPVHK
|
| |