| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1160 |
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| Symbol | |
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| ID | 4184532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1339834 |
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| End bp | 1340409 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638071157 |
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| Product | DNA-directed RNA polymerase specialized sigma subunit |
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| Protein accession | YP_677775 |
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| Protein GI | 110637568 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.647303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGGATA TAAACAGAAC AATTGTTGAA TGTATTAAAA ACAGGCAAAA CGAAAAAGCG
TTGTCTTATC TGTATAGTCA TACCCTCAAA AAAGTAAAAG GTTATATCTT AAGCAATAGC
GGCACGCAGG ATGAAGCAAA TGACATCTTT CAGGATGCGG TTATTATTTT CTTCAAATCT
GTAATCGAAA ACAAGTTTGA AGACAATTTA TCGGTTGATG CATACCTTTT CACGATATCG
AAAAACTTAT GGATCAATGC AGCTAAAAGA AAACGAAAGC TCGTTCATGT AGATATTGAA
GACCAGCATC TTTCAGCCGA ATCATATAAT CAGCTTGATT CTATGATCTC AGCCGAAAAA
AGAAAAGCAC TGGATATCGC TTACAGTAAA CTTGAAGATG CCTGCCGGAA ATTACTCGGA
CTGGTTGCAT ACGAAAAATT AAGTATGAAA GAACTTCAGG AAAAGATGCA GCTTTCCAGT
GAAAATGCAG CCAAAACAAT GCATTACAGA TGCAAACAAT CTTTCCATAA GATCATTAAA
GAAAATTCAG ATCTATTAAA TATACTAAAG CCTTGA
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| Protein sequence | MKDINRTIVE CIKNRQNEKA LSYLYSHTLK KVKGYILSNS GTQDEANDIF QDAVIIFFKS
VIENKFEDNL SVDAYLFTIS KNLWINAAKR KRKLVHVDIE DQHLSAESYN QLDSMISAEK
RKALDIAYSK LEDACRKLLG LVAYEKLSMK ELQEKMQLSS ENAAKTMHYR CKQSFHKIIK
ENSDLLNILK P
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