| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1136 |
|---|
| Symbol | |
|---|
| ID | 4185191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1309287 |
|---|
| End bp | 1310033 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638071133 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_677751 |
|---|
| Protein GI | 110637544 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00601185 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCT TACTATTCTT TGTTGCGCAT TGGTATCTAT CTTTATTTAT GCAGACATTC
TTTCTGCACC GGTATGCCGC ACATCAAATG TTTACCATGT CTAAAGGCTG GGAAAAATTC
TTTTACATAC TTACGTGGCT GTTTCAGGGT TCATCTTATC TGAGTCCCTA TGCATATGGT
GTGATGCACC GTCTGCATCA CACCTATGCA GATACAGATA AAGATCCGCA CTCTCCTAAA
TATTCTACCG GAATGTTTGA TATGATGTGG AAGACTAAAA ATATTTATAA TGACATTTTA
CACGGACGCA TAGAGCTTGA TCCGAAGTAT AAAAAAAATG TACCTTACTG GGGATTTATA
GAAAAGATGG GAGACAATTG GTTTTCACGT GTTGCGTGGG GTACTGCCTA TACCCTGTTC
TATGTATATT TTGCAACACA TTGGTGGATG TTTTTATTAC TACCGATTCA TTATCTGATG
GGCCCTGTAC ACGGAGCTAT TATTAATTGG TTTGCCCATA AATATGGTTA TGTAAACTTT
GTAGTTAATG ATACGGCTAA AAACTTACTG CCTGTTGATT TTCTCATGTT TGGAGAAAGC
TATCACAACA ACCATCACAA ACTTGGTGGC CGTGCTAATT TTGGTGTTAA GTGGCACGAA
TTTGATCCGG CCTACCCGAT CATCTTATTT TTCAATGCCT TTCACATCAT CAAATTAAAA
CGGAATAATG ATTTGAATTA CATGTAA
|
|---|
| Protein sequence | MIILLFFVAH WYLSLFMQTF FLHRYAAHQM FTMSKGWEKF FYILTWLFQG SSYLSPYAYG
VMHRLHHTYA DTDKDPHSPK YSTGMFDMMW KTKNIYNDIL HGRIELDPKY KKNVPYWGFI
EKMGDNWFSR VAWGTAYTLF YVYFATHWWM FLLLPIHYLM GPVHGAIINW FAHKYGYVNF
VVNDTAKNLL PVDFLMFGES YHNNHHKLGG RANFGVKWHE FDPAYPIILF FNAFHIIKLK
RNNDLNYM
|
|---|
| |