| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1073 |
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| Symbol | ybgC |
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| ID | 4184350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1242156 |
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| End bp | 1242593 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638071072 |
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| Product | thioesterase |
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| Protein accession | YP_677690 |
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| Protein GI | 110637483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.673051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.306888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGAAC ATTCAGTACA GATACGCGTC CGTTATTCGG AAACAGATCA AATGGCGTAT
GTATATTATG GAAATTATGC GAGTTATTTT GAAGTGGCGC GCGTGGAAGC CTTTCGCAGG
ATAGGTTTTT CTTACAAAGA AATGGAAGAA GCAGGTGTTA TGATGCCCGT TTTGGAATAC
AAAACGAAAT ACCTGAAGCC TGCAAAATAC GATGATCTGT TAACAATTAA GGTGTATATT
AAAAATAAGC CAGGTATTCG GATTACGTTT GATTATGAAG TTTATAATGA ACAGCATGTG
CTTCTTACAG TTGCAGAAAC CACACTGGTT TTTATAAACA GCCAAACAGG GAAACCAATG
CTTCCGCCGC CAGTATTCAT GTCTTTTTTT GAAAAATATT ATACGGATGA TAAACAAAAT
CAAATCCAGA ATTCTTAA
|
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| Protein sequence | MIEHSVQIRV RYSETDQMAY VYYGNYASYF EVARVEAFRR IGFSYKEMEE AGVMMPVLEY
KTKYLKPAKY DDLLTIKVYI KNKPGIRITF DYEVYNEQHV LLTVAETTLV FINSQTGKPM
LPPPVFMSFF EKYYTDDKQN QIQNS
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