Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1066 |
Symbol | |
ID | 4185024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1231899 |
End bp | 1232432 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638071065 |
Product | hypothetical protein |
Protein accession | YP_677683 |
Protein GI | 110637476 |
COG category | [R] General function prediction only |
COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.261002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.529403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACAAT CCCCTCACGC GCGCGCTCCG GAATACCGTT CTGCCACCGC ATCTCCTGAC ACAGGAAACG CACCGGGCAT GAAGGTTAAA TTACTCAGCA CTGCGGGTGA TGTAAAAACA TACGCGGTTA TTTTTTCAAC CGGCGATGAG GTCGTATCCG GACTAACGGA ATTTGCACAC ACCTACAAAG TAAAAAGCGG ACACTACCAG GGCATTGGCG ATGCGCTCCA TGTAGAAGCG GGCTGGTTTG ATTATCACCG TAAAGAGTTT TTAGTGATTC CGCTGGATAC GGTTGAAATA ACCTCTTTCA CCGGAGACAT TGCCTGGTAT AATGGCAAAC CCGTTGCCCA TACGCATGTC AGCGCATCGT TGAAAGATGG CTCCGTGAAA GGCGGACATT TACTGAAACT GATCGTTGGG CCAACGCTTG AAGTAATGGT TACCGTTGAA CCCACTCCCC TATACAAGCG TTTAAACGAA TCTTTCAACG CAGCAGTTAT TGACCCGGAG ATAACAAAAG ATAGTGGTAA GTAA
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Protein sequence | MKQSPHARAP EYRSATASPD TGNAPGMKVK LLSTAGDVKT YAVIFSTGDE VVSGLTEFAH TYKVKSGHYQ GIGDALHVEA GWFDYHRKEF LVIPLDTVEI TSFTGDIAWY NGKPVAHTHV SASLKDGSVK GGHLLKLIVG PTLEVMVTVE PTPLYKRLNE SFNAAVIDPE ITKDSGK
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