Gene CHU_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1066 
Symbol 
ID4185024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1231899 
End bp1232432 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content48% 
IMG OID638071065 
Producthypothetical protein 
Protein accessionYP_677683 
Protein GI110637476 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.261002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.529403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACAAT CCCCTCACGC GCGCGCTCCG GAATACCGTT CTGCCACCGC ATCTCCTGAC 
ACAGGAAACG CACCGGGCAT GAAGGTTAAA TTACTCAGCA CTGCGGGTGA TGTAAAAACA
TACGCGGTTA TTTTTTCAAC CGGCGATGAG GTCGTATCCG GACTAACGGA ATTTGCACAC
ACCTACAAAG TAAAAAGCGG ACACTACCAG GGCATTGGCG ATGCGCTCCA TGTAGAAGCG
GGCTGGTTTG ATTATCACCG TAAAGAGTTT TTAGTGATTC CGCTGGATAC GGTTGAAATA
ACCTCTTTCA CCGGAGACAT TGCCTGGTAT AATGGCAAAC CCGTTGCCCA TACGCATGTC
AGCGCATCGT TGAAAGATGG CTCCGTGAAA GGCGGACATT TACTGAAACT GATCGTTGGG
CCAACGCTTG AAGTAATGGT TACCGTTGAA CCCACTCCCC TATACAAGCG TTTAAACGAA
TCTTTCAACG CAGCAGTTAT TGACCCGGAG ATAACAAAAG ATAGTGGTAA GTAA
 
Protein sequence
MKQSPHARAP EYRSATASPD TGNAPGMKVK LLSTAGDVKT YAVIFSTGDE VVSGLTEFAH 
TYKVKSGHYQ GIGDALHVEA GWFDYHRKEF LVIPLDTVEI TSFTGDIAWY NGKPVAHTHV
SASLKDGSVK GGHLLKLIVG PTLEVMVTVE PTPLYKRLNE SFNAAVIDPE ITKDSGK