Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1057 |
Symbol | fabG |
ID | 4185015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1222704 |
End bp | 1223396 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638071056 |
Product | short chain dehydrogenase; 3-oxoacyl-[acyl-carrier-protein] reductase |
Protein accession | YP_677674 |
Protein GI | 110637467 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.474453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACGCA GAACGTTTTT ATTTGCGGGC GCTTCCAGTG CCATTGCCAG ACAAACAGCA ATGCTGCTGA AAGAAAAAGG TCATAGCGTA ATTGGATTAA GCAGGAAAGA ACCGGATGAC ACGTACGACG AATATTACCA GGTATCAGGC TATGATTTCT CAACCTTTCC GGAAATTGGC AAGCCAATAG ATGGCTTGGT ATATTTCCCT GGCACGATAC ATTTAAAACC CGTTACGCGC TTTACACCTG CTGAGTTTAC AAGTGATCTG CAAATAAATA CATTAGGAGC TGCGGCTTTT GTTCAGGCCT ATTTATCGGA TTTAAAAAAA TCGCCCAACG CCTCCATTGT ATTTTTAAGC TCTGTTGCAG CATCTGTAGG TCTGCCCTTC CATACTTCCA TTGCTATGGC AAAAGGCGCG CTTGAGGGTT TTGCAAAGGC TTTAGCAGCA GAATTAGCAC CAGCTATCCG GGTAAATGTT GTAGCTCCCT CTTTGCTGGA TACTCCGCTT GGCAATACAT TCATACATAC ACCCGATAAG CTTGAAAACA TGCAAAAGCG CAACCCGCTG CGCCAGATCG GTAAACCTAC GGATGTTGCC AATGCCATCG CATTCTTATT GTCTGAAGAA TCGGCATGGG TTACCGGACA GGTATTTGCA ATTGACGGAG GAATGAGCAC AATAAAAAAC TAA
|
Protein sequence | MIRRTFLFAG ASSAIARQTA MLLKEKGHSV IGLSRKEPDD TYDEYYQVSG YDFSTFPEIG KPIDGLVYFP GTIHLKPVTR FTPAEFTSDL QINTLGAAAF VQAYLSDLKK SPNASIVFLS SVAASVGLPF HTSIAMAKGA LEGFAKALAA ELAPAIRVNV VAPSLLDTPL GNTFIHTPDK LENMQKRNPL RQIGKPTDVA NAIAFLLSEE SAWVTGQVFA IDGGMSTIKN
|
| |