Gene CHU_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1057 
SymbolfabG 
ID4185015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1222704 
End bp1223396 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content45% 
IMG OID638071056 
Productshort chain dehydrogenase; 3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_677674 
Protein GI110637467 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.474453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCA GAACGTTTTT ATTTGCGGGC GCTTCCAGTG CCATTGCCAG ACAAACAGCA 
ATGCTGCTGA AAGAAAAAGG TCATAGCGTA ATTGGATTAA GCAGGAAAGA ACCGGATGAC
ACGTACGACG AATATTACCA GGTATCAGGC TATGATTTCT CAACCTTTCC GGAAATTGGC
AAGCCAATAG ATGGCTTGGT ATATTTCCCT GGCACGATAC ATTTAAAACC CGTTACGCGC
TTTACACCTG CTGAGTTTAC AAGTGATCTG CAAATAAATA CATTAGGAGC TGCGGCTTTT
GTTCAGGCCT ATTTATCGGA TTTAAAAAAA TCGCCCAACG CCTCCATTGT ATTTTTAAGC
TCTGTTGCAG CATCTGTAGG TCTGCCCTTC CATACTTCCA TTGCTATGGC AAAAGGCGCG
CTTGAGGGTT TTGCAAAGGC TTTAGCAGCA GAATTAGCAC CAGCTATCCG GGTAAATGTT
GTAGCTCCCT CTTTGCTGGA TACTCCGCTT GGCAATACAT TCATACATAC ACCCGATAAG
CTTGAAAACA TGCAAAAGCG CAACCCGCTG CGCCAGATCG GTAAACCTAC GGATGTTGCC
AATGCCATCG CATTCTTATT GTCTGAAGAA TCGGCATGGG TTACCGGACA GGTATTTGCA
ATTGACGGAG GAATGAGCAC AATAAAAAAC TAA
 
Protein sequence
MIRRTFLFAG ASSAIARQTA MLLKEKGHSV IGLSRKEPDD TYDEYYQVSG YDFSTFPEIG 
KPIDGLVYFP GTIHLKPVTR FTPAEFTSDL QINTLGAAAF VQAYLSDLKK SPNASIVFLS
SVAASVGLPF HTSIAMAKGA LEGFAKALAA ELAPAIRVNV VAPSLLDTPL GNTFIHTPDK
LENMQKRNPL RQIGKPTDVA NAIAFLLSEE SAWVTGQVFA IDGGMSTIKN