Gene CHU_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1045 
SymbolrecR 
ID4184381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1206846 
End bp1207463 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content37% 
IMG OID638071043 
Productrecombination protein RecR 
Protein accessionYP_677662 
Protein GI110637455 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.414763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.641702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTC CTTCTAAATT ATTAGAAGAT GCTGTATTGG AAATCTCAAA GCTCCCGGGT 
ATTGGAAAAA AAACAGCCTT GAGATTAGTA CTTCATTTAT TAAAGAAAGA AAGTAAAGAA
TCTGAAAGTC TGGCGAATGC ACTTTTAAAT GCGCGCGAAA ACATCAGGTA CTGTAAAAAG
TGTCATACCA TTTCAGATCA TGAACTGTGT GCTATTTGCA CCAGCAATAA AAGAGATAAA
CGTGTCGTTT GTATCGTAGA AGATATACGC GATGTGTTGG CAATTGAAAA TACAAACCAA
TATTTTGGTG TCTATCACGT GATCGGCGGA GTCATTTCCC CCATGGAACG TATAGGGCCG
GATCAGTTAA ATATAAACTC GTTAATCGAA CGTGTTATAA CCGACACCGA AATTAAAGAG
ATAATACTTG GACTTAGTCC AACGATGGAG GGTGATACAA CTGCATTCTT TATTACAAAG
AAACTGAAAT CCTACCCCAT TAAAATCAGC ACAATTGCCA GAGGAATACC ATTTGGAGGC
GAACTGGAAT ATATGGATGA AGTTACACTT GGAAGAAGTA TTGCAACCAG AACTTTATTT
GAAACAAAAG AAGATTGA
 
Protein sequence
MNFPSKLLED AVLEISKLPG IGKKTALRLV LHLLKKESKE SESLANALLN ARENIRYCKK 
CHTISDHELC AICTSNKRDK RVVCIVEDIR DVLAIENTNQ YFGVYHVIGG VISPMERIGP
DQLNINSLIE RVITDTEIKE IILGLSPTME GDTTAFFITK KLKSYPIKIS TIARGIPFGG
ELEYMDEVTL GRSIATRTLF ETKED