Gene CHU_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1035 
Symbol 
ID4184371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand- 
Start bp1195000 
End bp1195617 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content39% 
IMG OID638071033 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_677652 
Protein GI110637445 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.131148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATAA CAGCAAGTAA TATTGGCAAA CGATATAACA GAGATTGGAT CTTTAAAAAC 
GTTTCTGTTT CTGTTGAAAA TTGCTCAACC CTTGCGATTA CTGGTGCGAA CGGATCAGGA 
AAATCTACCT TACTACAAGT ATTAAGTTCA TTAACCGTAC CGACTGTCGG TACGGTTTCT 
TTTTTTTCAG GAACAGATAA AATTGAGGAT TCCGATCTAT ATAAACGTAT CTCCTACGTT 
TCTCCATATC AGGAAATCAT TGAAGAAATG ACCTTAGCGG AAATGCTGCA GTTCCACCAA 
TCCTTCAAGC AACTATCCAT TAAAGACAGC GCTGCGTTTG CTGCGTATTG CGGCATTAGC 
AAAGGACAGA ATAAAGAGAT CCGTAATTTT TCTTCCGGTA TGAAACAACG TGTTAAATTA 
GGTTTGGCAT TATTATCTGA TACCCCCCTG CTCTTTTTAG ATGAACCTAC CAGCAACCTG 
GATGAACAAG GCAGTAAATG GTATGTGAAT GAAGTAACAA AACTGCTTGG CAAAAAAACC 
ATTATTATCG CATCCAATAT TCCGGAAGAA TATGCGTTTG CGCAGAAGGT GCTGAAGATT 
TCGGATTACA TTTTATAA
 
Protein sequence
MKITASNIGK RYNRDWIFKN VSVSVENCST LAITGANGSG KSTLLQVLSS LTVPTVGTVS 
FFSGTDKIED SDLYKRISYV SPYQEIIEEM TLAEMLQFHQ SFKQLSIKDS AAFAAYCGIS 
KGQNKEIRNF SSGMKQRVKL GLALLSDTPL LFLDEPTSNL DEQGSKWYVN EVTKLLGKKT 
IIIASNIPEE YAFAQKVLKI SDYIL