Gene CHU_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1031 
Symbol 
ID4184367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1189967 
End bp1192681 
Gene Length2715 bp 
Protein Length904 aa 
Translation table11 
GC content40% 
IMG OID638071029 
Producthypothetical protein 
Protein accessionYP_677648 
Protein GI110637441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.251501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAC GAATCATACT TTTATTTATC TGCACTGGTT CATGTTTATT TTTCAAGAAT 
GATGTTCAAG CACAATTAAC GCTTTTTAAA GATAATAAAA CGTGCCTCTA TGGATATACG
AATGATTCAG GAAAATGGAT TGTACAGCCG CAATACCTAC ATGCAGAAGA ATTTTATGGA
GGATATGCTA TTGTAGGAAT CAACGAGCGC AAGGGATTAC TTGATACGAT TGGCAACGTG
ATCGTACCCT TACAATATGA TTATATCATT CGTGAAAACG GGTGGTATGT ACTGAAGCAT
GACACCGTTT ATGATGTATT TGATCCCGTT TCTAAAAAAA TAATGATCAA AGATTTTCCG
CATATGATTA TAGCATATGA AAAAGAATAT GTGCTCTTTA AAAATCAGGA TAGCTATGGC
TTGGCTGCGG GCAATACCAT CCTGCTGGAA AATTCAATCC GTATCGATAT TAATCCCCGT
GATCAGTCAG CAATTGTACA TTACGGACCT GCGTACAGCG ATTCCATACG CATCTATTTC
ATACAACAAC GTACATTTGC TCCGGATACC TATAGTTATC TGCACTGGAC GGATTCGAAT
CATTACCTGG CAAAAAAGGG TAACGCTTAC GGATTGATCG ATCATACAGG AAAAACGATT
GTGTCATTTG ACTATACAGA TATTTATCTG AGCGACGCAG AAAACGCGCC ACTAGTGCTT
CAAAAAAAAC ACAACAAAGG ATACGATGTA TTTACTATTG CCGGACGAAA GTTGAATAAA
AAAGCGTATC AGCAAATAGA CACAGCAAGT CTCTTGCAAT ACAACATATA TATTGTCACG
CAAAAATCAA AACAAGGCGT ATTGAATACA GATGGTAAAT TAAAGATTCC GTGTGTATAC
GACAGTATTT CCTATGTCCT AGCCGGCGAC TATCCGGCTT ATCTGCTGCA TTCATCCAAA
GGTATTCAGG TTGCAAATAC AGCGGGCAAC ATATTGCACA ACGGTCATTA TGAGAATATA
GCGCTTTTAA AACCACTCTA TGCCCCTGAG CCTGAATATT CCTATGAGGA ACCGCTTCCC
CCTTACATTA TTTCTATCCT GCCCGATACA TCTGTTATTG TATTGAATGT CCGTGATTCA
ACAGAATATC GTTCTGCTGC AGGTGAATAT GCTGATGCAA GCTACCTGCT GTATTCTAAA
GGTAAGTATG GTATGATCTC CGGCGGCTTG CAGCAGGTAG TACCACCGGT ATATGATTTT
ATTTTCCCGT TTCAAAGCGA ACATTCTTAT ACAACAATAC TTCAACAGGG GCGGTTTGGC
ATTCTGGATC TTTATGGAGA TGTGATCATA CCGCCGGAAT ATCTTTTCAT CAGTGAAAAT
CCGTTATCGG ATGAATCCTT TATTTTTATG ACAGAAGATT ATTTATTCGG CATAAAAAAT
ACTGCGGGAG AAATATTGGT TGAACCGGTT TATACAGCGC TGAGCGGTTA TGATCCTGAA
AAAGATTATT GCTGGGCAAA ACATGCCGAC AGCTCCGAAC TCAGGCTGAT TGACAGGAAT
GGCTCGTTAA AGAGTCCGCT TGATTTTGCA TATCCCATTA ATCTGGCTTC ATCCGGCGGG
GTGGTCATAC AAGCCACAAC CGAAGACCTT TACAACGAAA CATATAAAAC AGGTGTACTG
GACTGCAATA CATTCCAGCC GGTTGTACCT TTTAGCTATG CGCTTATTGT TCCGGTTAAC
GACAGCATCT ATCTGTGCAC AACAGAGGAA AGTTATACGG ATTCAACGTA TACAGATTTA
TACATCCAGC AGATGCACCT TGATTCTGTT ACCGGCTGCG CTCTATTGCC TGACCAGATC
ATTGCGATAG AGCGCTGTTA CAGCTGGGGA TATTTAAAAA ACGGCAAATG GCTTGTAAAG
CCTGGCACAA AGCCTGATGT ATATGGTGCT GAGATACGTG AACTATTACA AATGCAATCA
CAAACAATAA ATAGCTATAT GTCTGATCTG TATGGCGGTG AGTATGAAAT CACACTGGCG
TTTGACTCGA CACACATACA TACGGCATTA AGCAAACTTC TCAACTATGA ACTGATACGA
TCATTCAGCA ACGATCAGAA GCGTACATTT AATAATCTCT ACATCGAAGA AGACATGGAA
AATCGGCTTG TTTTGTACGA CAGGGATTAT GTTGACATAT TGATTCAATC TGCTTATGAA
CCGGATGAAG AAATGTATTA CGGCTATCGT AACGGCTACG CATCCGGCGG CAGCGAAACA
ATTACGGCAG TAGTACATAC ATCATCATTC GGAGAAATCA GGTCGTACAG CGAATCATGG
GAAAGAGCCT CTTATTACGT GCATCATGAA AATATTCTGT ATACCATTAC CAGCAATAAT
CAGCTGAAAC AACTATCGCT GGCAGATGTC ACCAATCACC TGCAGCATAC AGCTATATTG
AGCAGTTTGA TTAACCTGCA GCTGGATTCA ATGGAAGATA TTCAGCTTTC GTGCACAGAC
CGCGAACAGA TTGTCGAACT CGCTACGGGA TATCAGTTTG AAAAAGAAGG CTTGCTTTTT
TATTTCGAAG ATGAACGTTC GCAAAACAGC TATGAATACG AAGAAATAGA AGTACTTCTT
CCCTACTCGC AGCTAATCCT TTATTTTAAA AAATCTGCTT ACCTTACGGA ATTGTATAAA
AATTCTCTTA AATAA
 
Protein sequence
MLKRIILLFI CTGSCLFFKN DVQAQLTLFK DNKTCLYGYT NDSGKWIVQP QYLHAEEFYG 
GYAIVGINER KGLLDTIGNV IVPLQYDYII RENGWYVLKH DTVYDVFDPV SKKIMIKDFP
HMIIAYEKEY VLFKNQDSYG LAAGNTILLE NSIRIDINPR DQSAIVHYGP AYSDSIRIYF
IQQRTFAPDT YSYLHWTDSN HYLAKKGNAY GLIDHTGKTI VSFDYTDIYL SDAENAPLVL
QKKHNKGYDV FTIAGRKLNK KAYQQIDTAS LLQYNIYIVT QKSKQGVLNT DGKLKIPCVY
DSISYVLAGD YPAYLLHSSK GIQVANTAGN ILHNGHYENI ALLKPLYAPE PEYSYEEPLP
PYIISILPDT SVIVLNVRDS TEYRSAAGEY ADASYLLYSK GKYGMISGGL QQVVPPVYDF
IFPFQSEHSY TTILQQGRFG ILDLYGDVII PPEYLFISEN PLSDESFIFM TEDYLFGIKN
TAGEILVEPV YTALSGYDPE KDYCWAKHAD SSELRLIDRN GSLKSPLDFA YPINLASSGG
VVIQATTEDL YNETYKTGVL DCNTFQPVVP FSYALIVPVN DSIYLCTTEE SYTDSTYTDL
YIQQMHLDSV TGCALLPDQI IAIERCYSWG YLKNGKWLVK PGTKPDVYGA EIRELLQMQS
QTINSYMSDL YGGEYEITLA FDSTHIHTAL SKLLNYELIR SFSNDQKRTF NNLYIEEDME
NRLVLYDRDY VDILIQSAYE PDEEMYYGYR NGYASGGSET ITAVVHTSSF GEIRSYSESW
ERASYYVHHE NILYTITSNN QLKQLSLADV TNHLQHTAIL SSLINLQLDS MEDIQLSCTD
REQIVELATG YQFEKEGLLF YFEDERSQNS YEYEEIEVLL PYSQLILYFK KSAYLTELYK
NSLK