Gene CHU_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1026 
Symbol 
ID4183763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1182280 
End bp1183512 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content41% 
IMG OID638071024 
Producthypothetical protein 
Protein accessionYP_677643 
Protein GI110637436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000494249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA ATAAACAGGC ATATATTATT TTTATTTTAA TTCTGAGCAC AGCATTGTTT 
AGCAATTGCC GGAAAGAAAA AATTGCACCG GAACAGGCAG ACAGCTTTAT TAAATATTAC
GGTAAGAGCG GAAATCAAAA AGCAGGTAAT GTAGTAGCAA CCAATGATGG CGGTTATATA
TTAGTTGGTA CTACGGATGC TTACGGAAAC GGTAAACAGA TACTGGTTGT AAAGACCGAT
GCATATGGGA ATGAACAATG GAATAAAATA TTCGGCGGTG CAGGGGATGA TGAAGCATAC
AATATTCAGG TAGCAGCGGA TGGCGGTTAT GTGATTGCAG GGTCAAAAGC GGAAAGTGCC
GGTACAAATA CCAATGCCTG GATCATTAAA CTGAGCAGCG ATGGAACAGA AATCTGGACA
AAAGAGTTTG GTGTAACAGG AGAGAATGAA TCTGCTGCGC GTATCATAAA TACGCCTACG
GATGGAGGGT ATATCACTGT TGGTACAACC ACAAATTTCC CGGCCGCAAA AAGTGCTGTG
TACCTGTTAA AAATGACAGC AACAGGCGAT ACAATCTGGA GTGCAAAATA TGGTAACGGT
ACAAGCAATG ATTTGTTTAA TTATGGAACT GCCATACAGC AGATTGATGA TATGAATTAT
CTGACCAGTG CTTACACGAG AGATGCCGGA GGTAGCACAT CCAGCTTTGA TATGTTGGTG
ACAACAGGAA GATTTGAAGA GACAGGTTAT GGCAGTGCTT CTAACATTGG AAAAGGTACA
TATCAGTCTC AAAATATAGA TATTAAAGAC GCGCAGGATA TTATTCTTGC TGCTGCAGGA
GATAAATACA TTCTAGGCAC AACCACAACG GGAGATGTGT ATATTTTACA CACAGCAGTT
AATGAAGATT TTATTGCATA CAAATCTTTT GAGACGCCGG ATCTTGATAT TGTTTCCGGT
TTTTTAAAAA CAGCTGACGG CGGTTTTGTT ATTGCCGGAT CAACAATAAA GAATGGCAGT
ACGGATATAT TAGTAATTCG TACGGATTCA AACCTGTCTC CAATCTGGAC AAAAACATTT
GGCGGCACAG GGGAAGATAC CGGCTCTTCT ATTATTCAAT TGCCGGATGG AAGTTTCGCT
GTTTCAGGTA CTATTGCGTT CGGCGGTAAT GCAACAGGAG CCAATGCTGT TATGGCGCTC
ATTCATATTG ATTCAAACGG CGAATTGAAA TAA
 
Protein sequence
MKNNKQAYII FILILSTALF SNCRKEKIAP EQADSFIKYY GKSGNQKAGN VVATNDGGYI 
LVGTTDAYGN GKQILVVKTD AYGNEQWNKI FGGAGDDEAY NIQVAADGGY VIAGSKAESA
GTNTNAWIIK LSSDGTEIWT KEFGVTGENE SAARIINTPT DGGYITVGTT TNFPAAKSAV
YLLKMTATGD TIWSAKYGNG TSNDLFNYGT AIQQIDDMNY LTSAYTRDAG GSTSSFDMLV
TTGRFEETGY GSASNIGKGT YQSQNIDIKD AQDIILAAAG DKYILGTTTT GDVYILHTAV
NEDFIAYKSF ETPDLDIVSG FLKTADGGFV IAGSTIKNGS TDILVIRTDS NLSPIWTKTF
GGTGEDTGSS IIQLPDGSFA VSGTIAFGGN ATGANAVMAL IHIDSNGELK