| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1006 |
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| Symbol | rhlE |
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| ID | 4186917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1154978 |
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| End bp | 1156369 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071003 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_677623 |
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| Protein GI | 110637416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.456237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0983747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACACACC CCTTGAATTT CGAAGAACTT AAATTAAACA GACAACTTCT CAATGCTATT
GAAGAAGCTG GTTATACTGA ACCTACTGAA ATTCAGTCTA AAGCAATACC GCAGATTCTG
GCGGGCCACG ACATCATCGG TGTGGCACAA ACCGGTACCG GTAAAACGGC TGCCTATGCC
CTGCCCATTC TGATGAAAAT CAAATATGCA CAGGGACATA ATCCAAGAGC GGTAATTTTC
GGACCAACCC GCGAGCTGGT GATGCAGATT GAAATTGCCA TGAAACAGCT GGCAAAATAT
ACAGACTTAC GCATTGTTGC ACTCTATGGC GGCATAGGTC CTAAACTTCA AAAAGAACAC
TTACAAAAAG GCGTTGATAT TATTGTTGCT ACCCCAGGCC GTTTTCTGGA TCTGTATCTG
GAAGAAGAAA TTGTGTTGAA GGAAGTAAAA ACAATGGTGC TGGATGAAGC CGATAAAATG
ATGGACATGG GATTTATGCC GCAGCTGCGC AAGATGCTCG AAGTTATTCC GCGGAAAAGA
CAGAACCTGC TTTTCTCGGC AACCATGTCT GAGCGTGTGG AACGTTTAAC CGAAGAGTTT
CTGGAATATC CAATGAAGAT CGAGGTTACA CCGCAGGCGA CACCAGCTAC ACTCATCAGT
CAGAAGTTGT ACAAAGTACC CAACTTTAAA ACTAAAATTC ATTTATTAGA ATATTTAATT
CGAAAAGATG AATCCGTAAC CCGTGCCATT ATTTTTGTAC GAACGAAAAA ATCAGCAGAC
GATATATATA AATTCATTAT CCGTAAAACA ACCAATACCT GCCGCATCAT TCATGCAAAC
AAAGATCAGA ACAGCCGCAT CAATGCAATG GATGATTTTA AAGACGGCAC CATCAAAATA
CTCGTTGCTA CCGATGTGGC AGCCAGAGGT ATTGATGTGC ATGAAGTAAG CCATGTGATC
AATTTTGATG TACCGATCAT TTACGACGAT TACATACACC GCATCGGGCG TACAGGCAGA
GCTAATCATA CAGGCGTTGC GATCACATTT GCTACGGAAG CAGAAATGTA TCACATTGAA
AAGATCGAAA AGATTATCCG TATGCAGATT CCGGTAGAAG AGCTACCTGC CGCGGTAGAA
ATTACGGAAA CAGGTTTCGA GGAAAGCCAG GAGTTCGCAC GTGAGTTGGA CTTTTATAAG
AAAAAAGAGG ATCCCACATA CAAAGGTGCG TTCCATGAAA AGAAACGTGA TTTGAAAGGC
GATGCGAAAC AAACTGCCTA CAAGCCGGGT AAATCAGTTA AAGCCAAGCC TTCCAAAGAA
ATACGTTTAG GAAAAAATAA ACCAAAGGCT AAACCAAGCA AACCGATTGC TCCTAAAAAA
CCAAAAAAAT AA
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| Protein sequence | MTHPLNFEEL KLNRQLLNAI EEAGYTEPTE IQSKAIPQIL AGHDIIGVAQ TGTGKTAAYA
LPILMKIKYA QGHNPRAVIF GPTRELVMQI EIAMKQLAKY TDLRIVALYG GIGPKLQKEH
LQKGVDIIVA TPGRFLDLYL EEEIVLKEVK TMVLDEADKM MDMGFMPQLR KMLEVIPRKR
QNLLFSATMS ERVERLTEEF LEYPMKIEVT PQATPATLIS QKLYKVPNFK TKIHLLEYLI
RKDESVTRAI IFVRTKKSAD DIYKFIIRKT TNTCRIIHAN KDQNSRINAM DDFKDGTIKI
LVATDVAARG IDVHEVSHVI NFDVPIIYDD YIHRIGRTGR ANHTGVAITF ATEAEMYHIE
KIEKIIRMQI PVEELPAAVE ITETGFEESQ EFARELDFYK KKEDPTYKGA FHEKKRDLKG
DAKQTAYKPG KSVKAKPSKE IRLGKNKPKA KPSKPIAPKK PKK
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