Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0954 |
Symbol | slyA |
ID | 4184930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1101406 |
End bp | 1101858 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070951 |
Product | transcriptional regulator |
Protein accession | YP_677571 |
Protein GI | 110637364 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0108393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTAG AAGACGAAAT AAAACAAGTA AAGGCTTTCA AAAACGATTA CAACAAGGCT GTTGTTAATC TTATTTTCAC CTACAACTGG TTAGAATCAT CCTCTAAGGC TTTTTTTAAA GATTTTGACC TTACCTCCCA GCAATTTAAT ATTTTGCGGA TTTTAAAGGG GCAGCACCCC AATCCGTCTA CGATAAATTT ACTTCGCGAC AGAATGCTTG ACAAAATGTG CGATGCTTCC AGATTAGTGG AACGATTACG TATAAAAGGT CTGGTTGAAC GTTCTCAGGC TTCTTCTGAT AAACGCGCTG TTGATATTTT CATTACAAAA AAGGGAGAAG AATTATTGGC GAAGATTGAA GTGGAATTTC CGGCATTTGA AGAAAAACTT CACACCCTTT CAGCGGAAGA AATTGTTGTT TTCAACAACT TATTAGACAA ATTAAGGGGC TAA
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Protein sequence | MRLEDEIKQV KAFKNDYNKA VVNLIFTYNW LESSSKAFFK DFDLTSQQFN ILRILKGQHP NPSTINLLRD RMLDKMCDAS RLVERLRIKG LVERSQASSD KRAVDIFITK KGEELLAKIE VEFPAFEEKL HTLSAEEIVV FNNLLDKLRG
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