Gene CHU_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0954 
SymbolslyA 
ID4184930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1101406 
End bp1101858 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content37% 
IMG OID638070951 
Producttranscriptional regulator 
Protein accessionYP_677571 
Protein GI110637364 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0108393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAG AAGACGAAAT AAAACAAGTA AAGGCTTTCA AAAACGATTA CAACAAGGCT 
GTTGTTAATC TTATTTTCAC CTACAACTGG TTAGAATCAT CCTCTAAGGC TTTTTTTAAA
GATTTTGACC TTACCTCCCA GCAATTTAAT ATTTTGCGGA TTTTAAAGGG GCAGCACCCC
AATCCGTCTA CGATAAATTT ACTTCGCGAC AGAATGCTTG ACAAAATGTG CGATGCTTCC
AGATTAGTGG AACGATTACG TATAAAAGGT CTGGTTGAAC GTTCTCAGGC TTCTTCTGAT
AAACGCGCTG TTGATATTTT CATTACAAAA AAGGGAGAAG AATTATTGGC GAAGATTGAA
GTGGAATTTC CGGCATTTGA AGAAAAACTT CACACCCTTT CAGCGGAAGA AATTGTTGTT
TTCAACAACT TATTAGACAA ATTAAGGGGC TAA
 
Protein sequence
MRLEDEIKQV KAFKNDYNKA VVNLIFTYNW LESSSKAFFK DFDLTSQQFN ILRILKGQHP 
NPSTINLLRD RMLDKMCDAS RLVERLRIKG LVERSQASSD KRAVDIFITK KGEELLAKIE
VEFPAFEEKL HTLSAEEIVV FNNLLDKLRG