| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0938 |
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| Symbol | |
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| ID | 4183637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1076078 |
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| End bp | 1081987 |
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| Gene Length | 5910 bp |
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| Protein Length | 1969 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638070937 |
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| Product | hypothetical protein |
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| Protein accession | YP_677557 |
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| Protein GI | 110637350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGGCT TGGGGATTTT CCATGAATTT AAATTCATAC TAATGAAGCA CTTATACAAT
CAAGTACTTG TTTGTTTATT GATGTTATCA GTTTTGTCGG TTTCTGCGCA AAACTTTCAG
CAAGCGAATA AAATTGCCGG TGCCGGCTAT AATAAATTAT ACGATGCTAC GACAGATGCC
TCAGACAATT TTTATGCAAT AGGGGCATTT GCCAGCACAA TAACCGTCCC TCAAAGCTTT
GGAGGGACAA GTACACTGGA TAAAACATTC TTAATTAAAT ATGATCCAAC TGGTGCTGTA
AGCTGGCTTA AAAGTATTAC AGGCAGTAGT GTGAAAGGAT ATCGCGTTGC TGTTGATGCA
TCCGGGAATG TGTTCATTGC CGGTTCTCTA TACGGTTCGT CTGTTTTTTT CGACGGCTTT
AACGCGAAAT ATTCGTTAAA TGGTCCTTCA GGAACAGTGC CGGATGGTTT TATTGCTAAA
TATGACAAGA ACGGTTTTTT TATTTGGGCA AGAGCTATTG GTTCAGCTGC ACGAAATGAT
GAAATATTTG ATATGACCAT CGATAAAGAC GGTGATGTAT ATGTTGTGGG ATATATCAGT
ACGGATGCAA AAGTTTACGG AAGAGATAGT GCTCTGGCAC AAGGGCCGTA TGGTTCAGAC
ATAGTATCTC AGGGAGGATC TCCGGGGTTG CTGGATGTAG TTGTTGCTAA ATTTAAAAAC
GATGGTTCGT ATCAATGGGG ATTCAGTTTG GGAAGTACAA CCGGAGCAGA GAGAGGTACA
TCAATTACAG TAGATCAAAA TAAAAATGTA TATGTTGCCG GTGAGTTATA TAATTCATTT
GATGTTGATC CGGGAACAGG TGTTACTACT ATTCAGGAAA GTATGCCGCA AGGTAGCGGA
GATATATTTA TTGCAAAATA TTCAACAACC GGAAGTTTTT TAAACGTGGG GCAAATTTCA
GGGGGGAGTG TAGAAAAGGT TAACCGAATG CACGTTGGTA ACTCGGGTGT ATTAAATGTA
GCAGGTTCTT TTGTAGATTA TATTGATGCC GATATCAGCA GTGGTGTTCA AAATCTGACT
GCTAATGGTG ATATAGGTAG TGATGCATTA ATTGCAGCAT ATGATCTCAA TACGTTTGCT
CCTGTTTTTA TTCAGCAGAT GGGAGGAGCC GATGTAGATG ACGAAGCGGT TAGTATTAAA
GCAACTGCTT CGGGCGAGAT ATATGTTACA GGTTTTTTCG CCGGTTCAGC GGTAAATTTC
AATCCGGCAG GTGCAGCACT TAATTTATCC AGCGTTGGTA ATAAAGATGT ATTTATTGCA
AAATATAATT CAAGCGGTGT TAACCAGTGG GCCATGGGTG TTGGTAGTGC AACAGAAGAC
AGAGGTACTG CGATCGATTT TAACGCTGCA GGTTTTGTGT ATGCCGGCGG TTATTATACA
GGTACCATTG GCGATTTTGA CCCCGGAGCA GGTACTTCAA CACTTACAAA TTTAGGCCAG
GAGGATGCAT TCTGGGCTAA ATATCAGGAA TGCAGTGGAA CACCTGTCAT CACAACACAA
CCGGTAGGTA AAACCGTATG TGCAGGTGCC GCAATAAACA TGACCATTGC TGCAACGGGT
TCTGGTGTTA CGTATCAATG GAAAAAAGGA TCAGCAAACG TTGTGAATGG AGGAGCAATC
AGTGGAGCTA CATCCTCGTC CTTGTCTATT TCGCCATCGG TTGCATCTGA TGCCGGTTCA
TACACCGTTG TAGTAACTTC ATGTGGTACC AGTCTGACAT CTTCTGCAGC TCTTGTGGTT
GTTAACATTC CACCCGCAAT TACTACGCAG CCTGTATCTA AATCAATCTG TTCAGGAGAT
AATACTTCCT TTACGGTTGC TGCAACAGGT ACTTCATTAA CGTATCAATG GAAGTTAAAT
AATGTTGCAA TTACTAATAA TGCTGTATAT GCAGGTGCAC AGGCAGCTAC GTTAAATCTG
GTGGGTGCTA CAGCTGCTCA GGCAGGAGAT TATACCTGCG TAATAACAGG ATCGTGTACA
CCGGTAGTGA CTTCAAGTAT TGCAACACTT ACTGTAGGTG CAGGAATAAG CATTACTACA
CAACCCGCAG CTACTGCTGC TTGCTTAGGA GGTGCAGCTA CATTTACCAC AGCTGCTTCG
GGTTCTTCAC TTACGTATCA ATGGCAAAAA AATGGGGTAA ACCTTGTTGA TGGTTCATCC
ATAAGTGGTG CAACTACAAA TTCGTTAACA ATAACAGGTG TTGTTGCTGG TGATGCAACG
AATTATAAAG CCGTTATTAC AGGATCATGC GGAAGCATCA CTACTTCTGC TGTAAATTTA
TCTGTAACGT CTTCTCCCAC CATATCTACA CAACCTCTCG CCTCGCAAAG TATTTGTGCT
GGTCAATCCG CTACGATTTC TGTTGTTGCG GTTGGAGGCG TTTCGTATCA ATGGAGAAAA
AACGGAACAG ATTTAACCAA TGGAGGTAAT GTGAGCGGAG CTTTAACATC GAGTTTACTT
TTAACTTCAG TAACATCTGC CGATGCAGGT ACTTATACTG TTTTGGTTAC AGGTGCATGT
GCTCCAACAG CGCTATCAAA TAATTCGAAT TTAACAATTA ATCTGTTACC TGCAATTGGA
ACACAACCAA CTCCGTTAAC GAGATGTGCG GGAGCAAATG CAACTTTTTC AATAACGGCA
ACAGGTACAG GTATTACATA TCAATGGAAG CGGAATGGCG TAGATCTGGC AGACGGCGGA
TCTGTATTTG GTGCAACAAC AAATTCAGTA ACCATTACTG GAGTTACGGT TTCTGACGCA
GGGAATTATA CCTGTACAGT TTCAGGAACC TGTTCGCCGG CAATTACTTC AAGTCCGGCG
GCGTTAACCG TAAACTCAAC TGCAAGTATA TCTTCAAGCC CTGCTTCAGC TACTATTTGT
GAAGGACAAA CAAAAGTATT TACATTAGGA ACAACAGGCT CAGGTATTAC TTACCAATGG
AAAAAAGGAA GCGTGAATCT TGTGGACGGA GGCAATATCA GCGGAGCACT AACAGGTTCT
TTAACTATAA CGGGAGTAAC AACAACCGAT GCCGGAAGTT ATAGTGTTAC AATTAATAAT
TCCTGTTCGG GAACATTAAA TTCAACTGCT GCTGTACTTA CTGTTAATAC GCTTCCCGTA
ATAACCAGCC AACCAACCGA TGTTACTATC TGCGGTTCTT CAAACGTATC TTTTTCAGTT
GCTGCCACTG GTACTGCGTT GACCTATCAA TGGAAAAAAG GCGGAGTTAA TTTAACGGAT
GGCGGAACTA TATCCGGAAG CAATTCAGCT ACACTGACTA TCACGCCGGC AGTTGCGGGC
GATGCGGGTG TATACACCTG TGTTGTATCC GGAACATGTG CGCCAAGTGC AACATCTTCT
CCTGCGAATT TAGCCGTAGG CACGGTTGCA ACCATTGTTA CTCAGCCAAC AGATAAAGTT
GTATGTGAAG GTTCAAGTAC ATCGCTTGCC GTTACTGTAA CCGGAGGAGG TATTAGTTAT
CAATGGAAAA AGAATGGAGT AGATTTAACG AATGGACCGA AAGTAAGCGG TGCTACAACG
GCTACGCTAA CGCTTTCAAC GATTGATGCC ACATTTGCAG ACTCCTATAC GGTTGTTACC
GGTAATACAT GCAGCGGATT TATTACATCA AACCCTGCAA CGATAACAAT AAATGCATTG
CCGGCCATAA CGGTACAACC CGTAAGTAAA TCCATCTGTG CCGGTGCATC AACATCTTTC
AGTATCACAG CTACAGGAGC AGGGCTGACG TATCAATGGA AAAAGGACGG CGCGGCATTA
ACGGATGGTG GGAATATTGC AGGCGCAACT ACAGCAACAC TTTCTTTGTC TTCAGTAACA
AGTGCTGATG CGGGAATATA CATCTGTGTA GTAAACGGTA CATGCCCACC TGCCGTTACT
TCAACAAATG CCACACTTAC AATTACTTCA GGTAGCAGTA TTATTTCTCA GCCCGTATCC
AAAGCGGCAT GTTCGGGAAG TTCTACCGTA TTTGTTTGTG ATGCAACAGG TGGTTCGTTA
ACCTATCAAT GGAAAAAAGA TGGTGTTAGC CTAGTGGATG GCGGAAATAT TTCCGGCGCA
CAAACCTTTA CGCTGACAAT TTCATCTGTT ACTGCAGCTG ATGCAGGAGA TTACGTATGC
GTAATTTCAA GTGCCTGTTC AGCACCATTA ACTTCAAATA CCGCTTCGTT AACGGTTAAT
GCATCAACAA CCATTAGTTC TCAACCAACA AATGTAACCA TATGTGAAAG TGGTGGAGCG
TCATTTACAG TTGCAGCAAC GGGAACAGGA TTAACGTATC AATGGAAAAA AGCAGGTTCA
CTGATTACAG GTGCTACCGC TGCAACATAT AGTATTCCTG CTGTTACAGC AGCCGATGCA
GGTTCATATG TAGCAGATAT TACAAGTAGT TGCGGTGTTT TGTCAAGTAA TGCGGCAACA
TTAACCGTGA ATACTCCAAT AGTCATTACC ACTCAACCTG TTTCTGTAAG TGCATGTCCG
GCAGAAAGTA TAACGTTTAG CGTTATTGCA ACAGGAAATA TCACTGCATA TAAGTGGCAG
AAAAATGGTG TTGATCTGGC AGACGGCGGA AATATTTCCG GTGCAACGAC CAATATACTT
TCAATCTCTT CAATAAGCGC TTCCGATGAA GATAATTATA CGGTAGTATT AACAGCTGTT
TGCGGTACAG ATGTCACATC TTCCAGTGCT GCATTATCAT TGGCAACTGC GCCTGTTATT
TCTGCACAGC CAACCAACAA ATTAGTTTGT GCCGGACAGA CATTAACATT AACAATCGGC
GTTACAAGCG GGTCTTCGGT TACGTATCAA TGGCAGAAAG ATGGTATAAA TCTTATAAAC
AGCGGTGCAA TTTCCGGTGC AACCAGTGCT ACCTTAACAA TTACAAATGT TTCAGTTGCG
GATGAAGGGA CGTACGTTTG TATGGTAGCA ACGAGCTGTT CAGCGCCCAC ATCAAGTGAT
CCTGCAGTAG TAACTACTAC AATTTCTTCA TCTATTACAC AACAGCCTAT TACTGCGAAT
ATTTGTAATA ATCAATCTGT ATTATTCAAA ATAACCATAG CCGGTGCCGG TATTGTATAT
CAGTGGCAAT TTAAAGCAAA TGCTGCTACG TCTTATTCAG ATCTGACAAA CGGTGGGAAA
TATAGCGGAG TCAATACAGC AAGTTTGTCA ATTATAAATT CAACTGCTTC AGAAGTTGGA
TCATACAGAT GCATGGTGAC AGAAGTGTGC GGCGCTGTTC AATATTCAGC ACCGGCAGCT
TTGATCATTG ATTCTCCAAC AATTGTTCAG CATCCATTCC CGCAATCAAT CTGTATCGGA
CAGCTTGCTA AATTTACAGT AGGTGCTACG GGCAGCAATT TAACCTACCA ATGGTATAAG
GATGGTATTG CGCTGGCAAA TGCGGGAAGA ATTTCCGGGG CTAAGTCTGC AACCATAATG
ATTACATCTA CAACACCCGC TGATAATGGA GAATATGTAT GTCAGGTTAA AGGTGTTTGC
TTACCGCCTG CTACTTCTCA GGAAGGTATC CTGACGGTAT CTGTTTGTAC ATCCGTTATA
GGATCTGAAT TAAATGACAA CAACGTTGTA ATTTATCCGA AACCAGCAGA TGTATATGCT
ACTATTGAAA TAAAAGACAA TGAGGGAACA GATGTATCAA TTGCAATATT TGATGCACAA
GGTTCTTTAA TAAAAATAAT TCAGCAGTCA ATCGAAACCG TAAACACAAA AATCAATCTT
AATACAGCTG AATTACCTCA AGGAATGTAT TTTGTACAAA TACAAATAGG GGATGAATTC
TATACGGATA AAGTTGAAGT AATTCACTAA
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| Protein sequence | MKGLGIFHEF KFILMKHLYN QVLVCLLMLS VLSVSAQNFQ QANKIAGAGY NKLYDATTDA
SDNFYAIGAF ASTITVPQSF GGTSTLDKTF LIKYDPTGAV SWLKSITGSS VKGYRVAVDA
SGNVFIAGSL YGSSVFFDGF NAKYSLNGPS GTVPDGFIAK YDKNGFFIWA RAIGSAARND
EIFDMTIDKD GDVYVVGYIS TDAKVYGRDS ALAQGPYGSD IVSQGGSPGL LDVVVAKFKN
DGSYQWGFSL GSTTGAERGT SITVDQNKNV YVAGELYNSF DVDPGTGVTT IQESMPQGSG
DIFIAKYSTT GSFLNVGQIS GGSVEKVNRM HVGNSGVLNV AGSFVDYIDA DISSGVQNLT
ANGDIGSDAL IAAYDLNTFA PVFIQQMGGA DVDDEAVSIK ATASGEIYVT GFFAGSAVNF
NPAGAALNLS SVGNKDVFIA KYNSSGVNQW AMGVGSATED RGTAIDFNAA GFVYAGGYYT
GTIGDFDPGA GTSTLTNLGQ EDAFWAKYQE CSGTPVITTQ PVGKTVCAGA AINMTIAATG
SGVTYQWKKG SANVVNGGAI SGATSSSLSI SPSVASDAGS YTVVVTSCGT SLTSSAALVV
VNIPPAITTQ PVSKSICSGD NTSFTVAATG TSLTYQWKLN NVAITNNAVY AGAQAATLNL
VGATAAQAGD YTCVITGSCT PVVTSSIATL TVGAGISITT QPAATAACLG GAATFTTAAS
GSSLTYQWQK NGVNLVDGSS ISGATTNSLT ITGVVAGDAT NYKAVITGSC GSITTSAVNL
SVTSSPTIST QPLASQSICA GQSATISVVA VGGVSYQWRK NGTDLTNGGN VSGALTSSLL
LTSVTSADAG TYTVLVTGAC APTALSNNSN LTINLLPAIG TQPTPLTRCA GANATFSITA
TGTGITYQWK RNGVDLADGG SVFGATTNSV TITGVTVSDA GNYTCTVSGT CSPAITSSPA
ALTVNSTASI SSSPASATIC EGQTKVFTLG TTGSGITYQW KKGSVNLVDG GNISGALTGS
LTITGVTTTD AGSYSVTINN SCSGTLNSTA AVLTVNTLPV ITSQPTDVTI CGSSNVSFSV
AATGTALTYQ WKKGGVNLTD GGTISGSNSA TLTITPAVAG DAGVYTCVVS GTCAPSATSS
PANLAVGTVA TIVTQPTDKV VCEGSSTSLA VTVTGGGISY QWKKNGVDLT NGPKVSGATT
ATLTLSTIDA TFADSYTVVT GNTCSGFITS NPATITINAL PAITVQPVSK SICAGASTSF
SITATGAGLT YQWKKDGAAL TDGGNIAGAT TATLSLSSVT SADAGIYICV VNGTCPPAVT
STNATLTITS GSSIISQPVS KAACSGSSTV FVCDATGGSL TYQWKKDGVS LVDGGNISGA
QTFTLTISSV TAADAGDYVC VISSACSAPL TSNTASLTVN ASTTISSQPT NVTICESGGA
SFTVAATGTG LTYQWKKAGS LITGATAATY SIPAVTAADA GSYVADITSS CGVLSSNAAT
LTVNTPIVIT TQPVSVSACP AESITFSVIA TGNITAYKWQ KNGVDLADGG NISGATTNIL
SISSISASDE DNYTVVLTAV CGTDVTSSSA ALSLATAPVI SAQPTNKLVC AGQTLTLTIG
VTSGSSVTYQ WQKDGINLIN SGAISGATSA TLTITNVSVA DEGTYVCMVA TSCSAPTSSD
PAVVTTTISS SITQQPITAN ICNNQSVLFK ITIAGAGIVY QWQFKANAAT SYSDLTNGGK
YSGVNTASLS IINSTASEVG SYRCMVTEVC GAVQYSAPAA LIIDSPTIVQ HPFPQSICIG
QLAKFTVGAT GSNLTYQWYK DGIALANAGR ISGAKSATIM ITSTTPADNG EYVCQVKGVC
LPPATSQEGI LTVSVCTSVI GSELNDNNVV IYPKPADVYA TIEIKDNEGT DVSIAIFDAQ
GSLIKIIQQS IETVNTKINL NTAELPQGMY FVQIQIGDEF YTDKVEVIH
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