Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0932 |
Symbol | surE |
ID | 4183631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1068913 |
End bp | 1069692 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638070931 |
Product | stationary phase survival protein SurE |
Protein accession | YP_677551 |
Protein GI | 110637344 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.147904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.032325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAC CATTAATACT TGTTTGTAAT GATGACGGCA TTTTTTCTGT AGGTATCCGC ACCTTAATTG AAGTAATGTC TGAACTGGGT GAAGTTGTGG TGGTAGCGCC GGATTCGCCT CAGTCTGGCA TGGGACATGC GATTACGATT GGTAATACAC TCCGGCTTGA AGCGAGCGAT CTGTTTCCGG GTATTGTAGC ATATGAATGT TCGGGAACAC CTGCTGATTG TGTAAAGCTG GCCAAGCACC ATGTATTGAA AGGCCGCAAA CCGGACCTGG TTGTAAGCGG AATAAACCAC GGAAGCAATT CATCTATAAG TGTATTATAT TCCGGTACCA TGTCGGCCGC AATTGAGGCC GCATTGGAAG GGTTGCCCGC TATCGGTTTT TCGTTGTGTG ATTATAACGC GCATGCTGAT TTTTCACACG TAAAAGCATT CGTAAAACAA ATTGCATCAG AAGTATTAAC CAACGGTATT GCTAAAGGCA TTACATTGAA TGTTAATTTT CCTGCCGTTA TAAATGCTCC GTTAAAAGGA ATTAAAATCT GCAGACAGGC ACATGCCCGC TGGGAAGAAA AGTTTGACGA ACGTTTTGAT CCCTACGGCA GAAGGTATTT CTGGATGGCA GGAAGTTTTG AAAATAAAGA TGCCGGTGAA GATACAGACG AATGGGCACT GGCCAACGGA TATGTTTCAG TAGTACCTTG CAGTTATGAT CTGACAGCGC ATCAGTTATT GGGCCAATTA AACAGAGACT GGAAATTCAT TCACGAATAA
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Protein sequence | MSKPLILVCN DDGIFSVGIR TLIEVMSELG EVVVVAPDSP QSGMGHAITI GNTLRLEASD LFPGIVAYEC SGTPADCVKL AKHHVLKGRK PDLVVSGINH GSNSSISVLY SGTMSAAIEA ALEGLPAIGF SLCDYNAHAD FSHVKAFVKQ IASEVLTNGI AKGITLNVNF PAVINAPLKG IKICRQAHAR WEEKFDERFD PYGRRYFWMA GSFENKDAGE DTDEWALANG YVSVVPCSYD LTAHQLLGQL NRDWKFIHE
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