| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0917 |
|---|
| Symbol | |
|---|
| ID | 4184106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1049393 |
|---|
| End bp | 1050304 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638070918 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677538 |
|---|
| Protein GI | 110637331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0467358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.490674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAT CATTATTTGT TAGGTTGGTT TTTTTATTTT TATGTATTGT TGCTGTTGAT
GCTGCTGCAC AAACACAAAG AAAAATATAT AAAGGACAAT ATCACAGAGG TAAAGCAACT
CCGGATATAT CATTAAAAAA TATTTCTAAA AATGAACTGC TGACAATTTA CGGTACGCTA
GGTTTAGCTT CATACAACGG TGATTTATCG GGCTATCTCT GGCAGGTAGG ATCTAACTCA
TACAGGCCTC AGGCAGGCGG AGGGGTAATA TTGCGTACCG CTTATTTAGG CAAACGTTTA
AATCTGAGAG CAGATGTACG TTGTTTCAGA TTATATTCCA ATGATGTGCA TGAGGGGCGT
AATTTAAATT TCAGATCAAC AAATTGGGAA TTTTTAGCCT TGGGACAGTT TGATATTTTC
CCATATGAAA AACTCATGCG CAGAAGGACA AAAATAAATC CATACGTATA TGGCGGGATT
GGTTTAATGA CATATGATCC ATGGGGACAG CTTCCAAATG GCAGATGGCA TCAATTAAGA
CCCTTAGAAA CAGAAAATGT GAAATATGGT AACGTAGCTT TTGTTTATAC AGTAGGATTA
GGTTTCAAGT ATAACTACAG TTACCGGTGG AACTTTATGT TGGAGGCAGG ATACCGTTTT
ACCACAACGG ATTATATTGA TGATGTAAGC AGTGAAGAGT ATCCTGATCC GGCGTCTCTG
CAAAATTCTA TATCAAGGAT TATGTCTAAC AAGTCATTTA ATAAATCTGC ACAAACAGGC
AGAGGAAACC CCAAATATAA AGACGGATAT GCAATCGTTT CAGTAGGCTT AACATATACC
TTTACAAGAC ATCATGCTAC GAAAAATAGA AAAGGTGGAT TACTGGACAA AAACTTATTG
CGCAAAAATT AA
|
|---|
| Protein sequence | MFKSLFVRLV FLFLCIVAVD AAAQTQRKIY KGQYHRGKAT PDISLKNISK NELLTIYGTL
GLASYNGDLS GYLWQVGSNS YRPQAGGGVI LRTAYLGKRL NLRADVRCFR LYSNDVHEGR
NLNFRSTNWE FLALGQFDIF PYEKLMRRRT KINPYVYGGI GLMTYDPWGQ LPNGRWHQLR
PLETENVKYG NVAFVYTVGL GFKYNYSYRW NFMLEAGYRF TTTDYIDDVS SEEYPDPASL
QNSISRIMSN KSFNKSAQTG RGNPKYKDGY AIVSVGLTYT FTRHHATKNR KGGLLDKNLL
RKN
|
|---|
| |