Gene CHU_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0855 
Symbol 
ID4184214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp979362 
End bp980165 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content30% 
IMG OID638070858 
Producthypothetical protein 
Protein accessionYP_677479 
Protein GI110637271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.635921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.118834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC CAATTATTAT TTCAATTCAC AATTATAAAT CAGCTGGTGT TACATTTTAT 
TCAATCATTG ACAGGCAATT TAAAAAGGAT GAAATTTTAA ATTCAGATTT GTTAGGTATG
GATGATACTT ATTTAATGCT TAGTCAGGCA GATGAAAAAA TAATAAATAA AATAAAAATC
ATTCATGGGC ATTTTCCATT TGGTCTGGAT AGACTTTTGC CACAAAAATC CACCTACATT
ACTTTTTTAA GAAATCCCAT AGAACGCCTT ATTTCAGATT ATTATTATTG TAAAGATTTT
GCACTGGCTC ATAATCATAG CTACGCATCT ACAATGTCAT TTAAAGAATA TTTGTCCTGC
AGCGATATTT TAAATATAGA TAATGGGCAG ACACGTTTTG TTGCAGGCGG TGAAAACGTA
CCTTATGGCG ATAATTCAAT AGAGATGTTA AACCGTGCAA TTGAAAATAT TGAGAAACGG
TTTTCATTTG TTGGTATAAC TGAAAAATTT GATGAATCGT TATTAATTGC AAACGCTGTT
TTTTCCTGGA ATCAATATTA CTATACATCA AAAAATATCA CCTCATCAAA GTCTTATGAT
TTTGATGAAG AAACCTGGGA ATTGCTTCGT AAAAGAAACT TTCTTGATTT ACAATTGTAT
GAATACGCAT TGAAAAAACA TGCAGGTGAT TTGAAAAAAA TTCCTTATGT TAAATTGAAA
ATGATTCTTC TTAAGACGCT TAAATCACTG TTTGTAGTAA CAAAGAGTAT TTATGCACCC
GTTAAAAAAC GTTTTTTCAG ATAA
 
Protein sequence
MSEPIIISIH NYKSAGVTFY SIIDRQFKKD EILNSDLLGM DDTYLMLSQA DEKIINKIKI 
IHGHFPFGLD RLLPQKSTYI TFLRNPIERL ISDYYYCKDF ALAHNHSYAS TMSFKEYLSC
SDILNIDNGQ TRFVAGGENV PYGDNSIEML NRAIENIEKR FSFVGITEKF DESLLIANAV
FSWNQYYYTS KNITSSKSYD FDEETWELLR KRNFLDLQLY EYALKKHAGD LKKIPYVKLK
MILLKTLKSL FVVTKSIYAP VKKRFFR