Gene CHU_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0807 
Symbol 
ID4183981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp913253 
End bp914011 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID638070813 
Producthypothetical protein 
Protein accessionYP_677434 
Protein GI110637227 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0459938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTCAA CAGGTTATAT AATGGACTAC CATTCAATTC TTTTAATTTT TGTGCTGGGC 
GTTCTGGCTT TTTTATATTC ATCTATCGGG TACGGCGGTG CCATTGGGTA TTTAGCGGTT
ATGGCTTTGT TTGGAGTTGC ACCTGTAATG ATGAAAACAT CTGCGTTGAT TATGAATTTA
GCAGTGGCAG CAGCATCCTT TATTGGATTT TACAGGGGCG GTTATTTCAA GCTCAAATTG
TTTTGGCCCT TTGCCATCAC AAGTATTCCT ATGGCTTATC TGGGCGGTAT GATGACCCTG
TCAGACAGTA TTTACAGGAA AATTTTAGCT GTTTGTTTAT TGATTTCAAT TGTACGGTTG
CTGTATCAGT TCAGGCAGGC AAACCAGGAG ACGAAAGAAA TACCAATCGG CACAGCCCTG
GTTACAGGCG GGTTGATTGG GCTTCTGTCC GGTGCCATTG GCCTTGGCGG CGGAATCATT
TTAAGTCCGC TCATGCTGCT GATGCGTTGG GCAACGTTTA AAGAAACGGC AGCCGTTTCT
GCGCTTTTCA TTTCTGTAAA TTCATTATCC GGACTATTCG GGCAAATCAA CAAAGGAGGC
ATTCACCTCA CGCACAACTT ACAATATGCG GTGGCAGCAA CAATCCTGGG CGGACTGCTA
GGTTCGTACT GCGGCAGTCA AAAGTTCAAC GTACCCACAT TAAAATATCT ATTGGCCATC
GTACTAACCA TTGCAAGCTT CAAATTGATG TTTGCATAG
 
Protein sequence
MPSTGYIMDY HSILLIFVLG VLAFLYSSIG YGGAIGYLAV MALFGVAPVM MKTSALIMNL 
AVAAASFIGF YRGGYFKLKL FWPFAITSIP MAYLGGMMTL SDSIYRKILA VCLLISIVRL
LYQFRQANQE TKEIPIGTAL VTGGLIGLLS GAIGLGGGII LSPLMLLMRW ATFKETAAVS
ALFISVNSLS GLFGQINKGG IHLTHNLQYA VAATILGGLL GSYCGSQKFN VPTLKYLLAI
VLTIASFKLM FA