Gene CHU_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0788 
Symbol 
ID4183962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp891066 
End bp892061 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content41% 
IMG OID638070794 
Producthypothetical protein 
Protein accessionYP_677415 
Protein GI110637208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0367203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCAAA ACGGACTTGT TCAAATAAAA GCGGAAAGTG GAAAGTGGGG ATATGCCAAT 
CTTAAAGGAG AAGAAGTTAT TCCTGCGAAA TTTAAAAACT GCAATCCATT CTCATCCGAT
GGTTTTGCAG TGGTCGTGCT AACAAGCGGC TATTCCATCA TTAACGTGAA AGGCGAAGAA
ATTCCGACTG AGGTGCATGA CTATGAAATC ATACAAGGCA TTTTTGGTAT TGGTCCAAAG
GGTTTTGAAA ATGGTTTACT AGGCATTCGT TCAGGTAAAA AATGGGGCTA TTTAAATACA
TCCGGAAAGC TGGCTATTCC ATTGAACTAC GATTATATAA CTGAATTTAA CGGTGGTTAT
GCAACAGCTC GTAACGGAGG CCGCTTTATT GTTCTGGATA CAAAAGGAAA AGAAACATCG
TTGGTTAGCA AAGATAATAT TGATGACATA AAACATTTCT CAGAAGGATT GGCTCCGGTT
AGATCAAGCA ACGGACTGTT TGGTTTTGCA AATACAAAAG CAGAGATCGC TATTCCTGTA
CAGTTTAAAA GTGTCGGGTA TTTTTCCGGC GGACTTGCCT GGGCAAAAAA TACAGAAGGT
AAAGCTGGGT TTATAAATCC AAAAGGAGAA TGGGTAATTC AACCGACGTA TCTGGATGTT
ACCAATTTTG ATCCGGTATC TAAATTTGCA AAAGTAAAAC AGGAAAGCGG CTGGTCATAT
ATTGATGCTT CGGGTAAGCC ATTAGTTGTG TCGACAACTG AAAGCTGGGG CGATTTCAGC
GATGGTCTGG CAGCGGGAGA ACAAGGCGGC AAAAAAGGTT TTTATAATAC AAAAGGTGAG
TGGGTTATCA AGCCTCAGTT TGAAGGAGTA CGAAAATTTG AGAACGGCTA TGCAGCAGCC
AAACAAGGCG GTAAATGGGG CATAATTGAT GCGAGTGGTA ATTGGGTTAT TAAACCGGTT
TATAGCGGTA TAAACGACGT TGTGTTAATA AAATAA
 
Protein sequence
MAQNGLVQIK AESGKWGYAN LKGEEVIPAK FKNCNPFSSD GFAVVVLTSG YSIINVKGEE 
IPTEVHDYEI IQGIFGIGPK GFENGLLGIR SGKKWGYLNT SGKLAIPLNY DYITEFNGGY
ATARNGGRFI VLDTKGKETS LVSKDNIDDI KHFSEGLAPV RSSNGLFGFA NTKAEIAIPV
QFKSVGYFSG GLAWAKNTEG KAGFINPKGE WVIQPTYLDV TNFDPVSKFA KVKQESGWSY
IDASGKPLVV STTESWGDFS DGLAAGEQGG KKGFYNTKGE WVIKPQFEGV RKFENGYAAA
KQGGKWGIID ASGNWVIKPV YSGINDVVLI K