Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0788 |
Symbol | |
ID | 4183962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 891066 |
End bp | 892061 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070794 |
Product | hypothetical protein |
Protein accession | YP_677415 |
Protein GI | 110637208 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0367203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCGCAAA ACGGACTTGT TCAAATAAAA GCGGAAAGTG GAAAGTGGGG ATATGCCAAT CTTAAAGGAG AAGAAGTTAT TCCTGCGAAA TTTAAAAACT GCAATCCATT CTCATCCGAT GGTTTTGCAG TGGTCGTGCT AACAAGCGGC TATTCCATCA TTAACGTGAA AGGCGAAGAA ATTCCGACTG AGGTGCATGA CTATGAAATC ATACAAGGCA TTTTTGGTAT TGGTCCAAAG GGTTTTGAAA ATGGTTTACT AGGCATTCGT TCAGGTAAAA AATGGGGCTA TTTAAATACA TCCGGAAAGC TGGCTATTCC ATTGAACTAC GATTATATAA CTGAATTTAA CGGTGGTTAT GCAACAGCTC GTAACGGAGG CCGCTTTATT GTTCTGGATA CAAAAGGAAA AGAAACATCG TTGGTTAGCA AAGATAATAT TGATGACATA AAACATTTCT CAGAAGGATT GGCTCCGGTT AGATCAAGCA ACGGACTGTT TGGTTTTGCA AATACAAAAG CAGAGATCGC TATTCCTGTA CAGTTTAAAA GTGTCGGGTA TTTTTCCGGC GGACTTGCCT GGGCAAAAAA TACAGAAGGT AAAGCTGGGT TTATAAATCC AAAAGGAGAA TGGGTAATTC AACCGACGTA TCTGGATGTT ACCAATTTTG ATCCGGTATC TAAATTTGCA AAAGTAAAAC AGGAAAGCGG CTGGTCATAT ATTGATGCTT CGGGTAAGCC ATTAGTTGTG TCGACAACTG AAAGCTGGGG CGATTTCAGC GATGGTCTGG CAGCGGGAGA ACAAGGCGGC AAAAAAGGTT TTTATAATAC AAAAGGTGAG TGGGTTATCA AGCCTCAGTT TGAAGGAGTA CGAAAATTTG AGAACGGCTA TGCAGCAGCC AAACAAGGCG GTAAATGGGG CATAATTGAT GCGAGTGGTA ATTGGGTTAT TAAACCGGTT TATAGCGGTA TAAACGACGT TGTGTTAATA AAATAA
|
Protein sequence | MAQNGLVQIK AESGKWGYAN LKGEEVIPAK FKNCNPFSSD GFAVVVLTSG YSIINVKGEE IPTEVHDYEI IQGIFGIGPK GFENGLLGIR SGKKWGYLNT SGKLAIPLNY DYITEFNGGY ATARNGGRFI VLDTKGKETS LVSKDNIDDI KHFSEGLAPV RSSNGLFGFA NTKAEIAIPV QFKSVGYFSG GLAWAKNTEG KAGFINPKGE WVIQPTYLDV TNFDPVSKFA KVKQESGWSY IDASGKPLVV STTESWGDFS DGLAAGEQGG KKGFYNTKGE WVIKPQFEGV RKFENGYAAA KQGGKWGIID ASGNWVIKPV YSGINDVVLI K
|
| |