Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0778 |
Symbol | |
ID | 4184148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 878361 |
End bp | 880580 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070784 |
Product | glycosylhydrolase family 9 protein |
Protein accession | YP_677405 |
Protein GI | 110637198 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.225256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCAACC GTCCATTAAA AAAATCCTCT ATGATTAAAC TAAAAACACT TTCATTTACC GCATTGCTTT TTGTAGCAGG CTTATTTGCC CATGCTCAGT CGTTCAGTCC CTATATTGTT GTTGACCAGT TTGGTTATCT GCCCCTGGCA ACAAAAGTAG CCGTTATCAG AGACCCGCAT GTGGGCTTTG ACGCTGCTGA TGCCTTTACA CCGGGCACTT CGTATGCGTT GATTGATGCT ACAAACAATG CTGCTGTATT CACAGGTACA CCTGCCGCCT GGAAAAATGG TTTTGTGGAT ACAACATCCG GAGATAAAGC CTGGTGGTTT GATTTTACTT CTTATACAAC TCCCGGTAAA TATTATGTGA AGGATGTAAC AAACAATGCA CGTTCAGCAG AGTTTGTAAT CAGCACAACA GTTTATAAAG ATGTATTGAA AGCCGCTATG CGTATGCTGT ATTATCAGCG CTCCAGCTTT GCAAAAACAG AGCCTTATGC AGGAACAGGA TGGACAGACG CAGCAAGTCA CCTTAAACCT TTGCAGGATA AAAATGCGCA GTTATACAAT AATAAAACAA GTGCCACGGA GAAAGATTTA CACGGCGGCT GGTATGACGC AGGTGATCTG AATAAATATA CATCATGGAC TGCAAACTAT GTCATTACAT TGTTAACTGC CTACCAGGAA AACCCTGCTG CCTTTACTGA TGATTATAAT ATACCTGAAT CGGGGAATGG AATTCCGGAT ATCATTGACG AAGTGAAATG GGGCCTGGAG CATTTACTGC GCATGCAGCA AAGCAATGGA TCCTGTTTAT CTGTATTGAG TTCAGCAGGT GCCAGTCCGC CGTCTTCTGC TACGGGTCAA AGTTTATATG GCCCAGCTAC AACAAATGCT ACATTAAAAT GTGCCCAAGC ATTTGCACTG GCTGCTAACG TATACAAACA AGTTGATCCC GTATTATATG CGACATTTGC TACAACTTTG CAGACAAAAG CGATTGCAGC CTGGAACTGG GCAGGTGCAA ATCCGAATGT GACATTCAAT AATAACTCTG ACAGCAACGG ATCTAAAGGT TTAGCAGCAG GCAATCAGGA AACAAATGAT TTAGGAAGAA AAACATCCAG GCTTGGTGCT GCTTTATATT TATATGACTT AACGGGAGAA GCTTCGTATC TGAATTATTT TAATTCAAAT TATAAAGACA TGCCTCTTGT AGCATGGTAC AACGGTATCA GTCAATATTT TCTTGAATCA CAAAGCCTTC AATTATATTA TCTTTCACTA CCCGGCATAA GCAGTACTGT TGCTCAGGAC ATACGTTCCA GAACAAAAAT TGCTATTTAT AATTCCCGTG ATTTTGCTGA TGCACTTACT TCAGAACTCG ATCCGTACAG AGCATTCATC CGTGATTATA ACTGGGGTTC CAACCAATAC AAATCAAATT ATGGAAATTT ATTCTGGGAA TTAAATGAAT ATACTATTGA TAATGCAGGC AACAATGAAT TGTATCTGAA AGCTGCGGAA GAATATCTGC ATTACATTCA TGGTGTCAAT CCGCTTCAGT TGGTATACTT AACAAACATG AGCAGTTATG GTGCTGAGAA AAGTGTGAAT GAAATGTATC ATACATGGTT TGCGGATGGA AGTGCTAAGT GGGACCGTGT TGGCACATCA ACATACGGCC CGCCTCCGGG CTTTTTAATG GGTGGTGCAA ACAACAGTTA TGATTGGGAT GATTGCTGCT ATTCATCTTG CGGATCGCCA GGGAATACAG CTATTTGCAC CTCTACAACG CTGCCTAAAG AACAGCCGAA ACAAAAATCA TACAAAGACT TTAATACAAA CTGGCCACTG AATTCATGGC AGTTAACTGA AACAAGTTTA GGCTACCAGA CAGCTTACAT CCGTTTGTTA TCTAAGTTTG TTAATAATTC CAATATTACA ACCGGTTTAT TATCTTCTGC AAAAGCTCCG GGTATTCAGC TGAGGCCAAA CCCAACGCAG GATCTGGTAA CAATTGAATT CCCCTCATCT TTGGCTACAT CTGATATGAT CCATGTTGAG CTATATGATC TGACAGGTAA AAAAGTATTT ACGAAAGACA TTGAAAACAA CAGTTCTATT TCTACTGTTG CACTTGAAAA CGGTGTATAT GTACTGAAAG TAAATCAGGA TGGATTAATG TATACAGAAC GTATTGTAAA AATCAAGTAA
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Protein sequence | MCNRPLKKSS MIKLKTLSFT ALLFVAGLFA HAQSFSPYIV VDQFGYLPLA TKVAVIRDPH VGFDAADAFT PGTSYALIDA TNNAAVFTGT PAAWKNGFVD TTSGDKAWWF DFTSYTTPGK YYVKDVTNNA RSAEFVISTT VYKDVLKAAM RMLYYQRSSF AKTEPYAGTG WTDAASHLKP LQDKNAQLYN NKTSATEKDL HGGWYDAGDL NKYTSWTANY VITLLTAYQE NPAAFTDDYN IPESGNGIPD IIDEVKWGLE HLLRMQQSNG SCLSVLSSAG ASPPSSATGQ SLYGPATTNA TLKCAQAFAL AANVYKQVDP VLYATFATTL QTKAIAAWNW AGANPNVTFN NNSDSNGSKG LAAGNQETND LGRKTSRLGA ALYLYDLTGE ASYLNYFNSN YKDMPLVAWY NGISQYFLES QSLQLYYLSL PGISSTVAQD IRSRTKIAIY NSRDFADALT SELDPYRAFI RDYNWGSNQY KSNYGNLFWE LNEYTIDNAG NNELYLKAAE EYLHYIHGVN PLQLVYLTNM SSYGAEKSVN EMYHTWFADG SAKWDRVGTS TYGPPPGFLM GGANNSYDWD DCCYSSCGSP GNTAICTSTT LPKEQPKQKS YKDFNTNWPL NSWQLTETSL GYQTAYIRLL SKFVNNSNIT TGLLSSAKAP GIQLRPNPTQ DLVTIEFPSS LATSDMIHVE LYDLTGKKVF TKDIENNSSI STVALENGVY VLKVNQDGLM YTERIVKIK
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