Gene CHU_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0778 
Symbol 
ID4184148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp878361 
End bp880580 
Gene Length2220 bp 
Protein Length739 aa 
Translation table11 
GC content40% 
IMG OID638070784 
Productglycosylhydrolase family 9 protein 
Protein accessionYP_677405 
Protein GI110637198 
COG category 
COG ID 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.225256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAACC GTCCATTAAA AAAATCCTCT ATGATTAAAC TAAAAACACT TTCATTTACC 
GCATTGCTTT TTGTAGCAGG CTTATTTGCC CATGCTCAGT CGTTCAGTCC CTATATTGTT
GTTGACCAGT TTGGTTATCT GCCCCTGGCA ACAAAAGTAG CCGTTATCAG AGACCCGCAT
GTGGGCTTTG ACGCTGCTGA TGCCTTTACA CCGGGCACTT CGTATGCGTT GATTGATGCT
ACAAACAATG CTGCTGTATT CACAGGTACA CCTGCCGCCT GGAAAAATGG TTTTGTGGAT
ACAACATCCG GAGATAAAGC CTGGTGGTTT GATTTTACTT CTTATACAAC TCCCGGTAAA
TATTATGTGA AGGATGTAAC AAACAATGCA CGTTCAGCAG AGTTTGTAAT CAGCACAACA
GTTTATAAAG ATGTATTGAA AGCCGCTATG CGTATGCTGT ATTATCAGCG CTCCAGCTTT
GCAAAAACAG AGCCTTATGC AGGAACAGGA TGGACAGACG CAGCAAGTCA CCTTAAACCT
TTGCAGGATA AAAATGCGCA GTTATACAAT AATAAAACAA GTGCCACGGA GAAAGATTTA
CACGGCGGCT GGTATGACGC AGGTGATCTG AATAAATATA CATCATGGAC TGCAAACTAT
GTCATTACAT TGTTAACTGC CTACCAGGAA AACCCTGCTG CCTTTACTGA TGATTATAAT
ATACCTGAAT CGGGGAATGG AATTCCGGAT ATCATTGACG AAGTGAAATG GGGCCTGGAG
CATTTACTGC GCATGCAGCA AAGCAATGGA TCCTGTTTAT CTGTATTGAG TTCAGCAGGT
GCCAGTCCGC CGTCTTCTGC TACGGGTCAA AGTTTATATG GCCCAGCTAC AACAAATGCT
ACATTAAAAT GTGCCCAAGC ATTTGCACTG GCTGCTAACG TATACAAACA AGTTGATCCC
GTATTATATG CGACATTTGC TACAACTTTG CAGACAAAAG CGATTGCAGC CTGGAACTGG
GCAGGTGCAA ATCCGAATGT GACATTCAAT AATAACTCTG ACAGCAACGG ATCTAAAGGT
TTAGCAGCAG GCAATCAGGA AACAAATGAT TTAGGAAGAA AAACATCCAG GCTTGGTGCT
GCTTTATATT TATATGACTT AACGGGAGAA GCTTCGTATC TGAATTATTT TAATTCAAAT
TATAAAGACA TGCCTCTTGT AGCATGGTAC AACGGTATCA GTCAATATTT TCTTGAATCA
CAAAGCCTTC AATTATATTA TCTTTCACTA CCCGGCATAA GCAGTACTGT TGCTCAGGAC
ATACGTTCCA GAACAAAAAT TGCTATTTAT AATTCCCGTG ATTTTGCTGA TGCACTTACT
TCAGAACTCG ATCCGTACAG AGCATTCATC CGTGATTATA ACTGGGGTTC CAACCAATAC
AAATCAAATT ATGGAAATTT ATTCTGGGAA TTAAATGAAT ATACTATTGA TAATGCAGGC
AACAATGAAT TGTATCTGAA AGCTGCGGAA GAATATCTGC ATTACATTCA TGGTGTCAAT
CCGCTTCAGT TGGTATACTT AACAAACATG AGCAGTTATG GTGCTGAGAA AAGTGTGAAT
GAAATGTATC ATACATGGTT TGCGGATGGA AGTGCTAAGT GGGACCGTGT TGGCACATCA
ACATACGGCC CGCCTCCGGG CTTTTTAATG GGTGGTGCAA ACAACAGTTA TGATTGGGAT
GATTGCTGCT ATTCATCTTG CGGATCGCCA GGGAATACAG CTATTTGCAC CTCTACAACG
CTGCCTAAAG AACAGCCGAA ACAAAAATCA TACAAAGACT TTAATACAAA CTGGCCACTG
AATTCATGGC AGTTAACTGA AACAAGTTTA GGCTACCAGA CAGCTTACAT CCGTTTGTTA
TCTAAGTTTG TTAATAATTC CAATATTACA ACCGGTTTAT TATCTTCTGC AAAAGCTCCG
GGTATTCAGC TGAGGCCAAA CCCAACGCAG GATCTGGTAA CAATTGAATT CCCCTCATCT
TTGGCTACAT CTGATATGAT CCATGTTGAG CTATATGATC TGACAGGTAA AAAAGTATTT
ACGAAAGACA TTGAAAACAA CAGTTCTATT TCTACTGTTG CACTTGAAAA CGGTGTATAT
GTACTGAAAG TAAATCAGGA TGGATTAATG TATACAGAAC GTATTGTAAA AATCAAGTAA
 
Protein sequence
MCNRPLKKSS MIKLKTLSFT ALLFVAGLFA HAQSFSPYIV VDQFGYLPLA TKVAVIRDPH 
VGFDAADAFT PGTSYALIDA TNNAAVFTGT PAAWKNGFVD TTSGDKAWWF DFTSYTTPGK
YYVKDVTNNA RSAEFVISTT VYKDVLKAAM RMLYYQRSSF AKTEPYAGTG WTDAASHLKP
LQDKNAQLYN NKTSATEKDL HGGWYDAGDL NKYTSWTANY VITLLTAYQE NPAAFTDDYN
IPESGNGIPD IIDEVKWGLE HLLRMQQSNG SCLSVLSSAG ASPPSSATGQ SLYGPATTNA
TLKCAQAFAL AANVYKQVDP VLYATFATTL QTKAIAAWNW AGANPNVTFN NNSDSNGSKG
LAAGNQETND LGRKTSRLGA ALYLYDLTGE ASYLNYFNSN YKDMPLVAWY NGISQYFLES
QSLQLYYLSL PGISSTVAQD IRSRTKIAIY NSRDFADALT SELDPYRAFI RDYNWGSNQY
KSNYGNLFWE LNEYTIDNAG NNELYLKAAE EYLHYIHGVN PLQLVYLTNM SSYGAEKSVN
EMYHTWFADG SAKWDRVGTS TYGPPPGFLM GGANNSYDWD DCCYSSCGSP GNTAICTSTT
LPKEQPKQKS YKDFNTNWPL NSWQLTETSL GYQTAYIRLL SKFVNNSNIT TGLLSSAKAP
GIQLRPNPTQ DLVTIEFPSS LATSDMIHVE LYDLTGKKVF TKDIENNSSI STVALENGVY
VLKVNQDGLM YTERIVKIK