Gene CHU_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0749 
Symbol 
ID4183689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp844791 
End bp847490 
Gene Length2700 bp 
Protein Length899 aa 
Translation table11 
GC content41% 
IMG OID638070755 
Producthypothetical protein 
Protein accessionYP_677376 
Protein GI110637169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0833179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTTCT GTCTATTACT GGCAGAATCA ATCAATGCGC AAGCGCCTAT ATCAGATTCT 
CTGAAACTGA ATTTTAAAGA AGGCGTGCTC AATCCCATTA CCGATACCAC AACGCAGCGT
ACCGCACACG CACAATCCCT TGATTCTTTA AAAGCCAATG CCACGGATAC GCTTGATATT
CCCAAAAGTG ATATTGAAAC ACGCATCTTA TATACCTGCC GCGATTCGCT GCGCATGAAC
ATTGCCGAAC AGAAAGTGTA TTTATACGGA GATGCAAAAG TTACCTACGG CAGCCGCATT
CTGACAGCGG AATTCATGGA GATCAACTGG GCAACAAATG AAGTAAACGC ATACGGACTT
GTTGATTCGC TTAAGGGGAA AACCATCGGC AAGCCGGTCT TTAAAGAAGG CTCCGATATG
TATGTAGCGG AAACGATCCG GTACAATATG AAAAGCGGCA AGGGTATTAT CAGCGGTATT
GTTACCCGCC AGGGCGATGG CTACATACAG GGCGGACCAG TAAAGAAAAC GCCTGAAGCT
ATTTATGTAA AGCATGCCAT ATATACCACC TGTAATTTAC CGCATCCGCA CTTCTCTATT
AATGCATCAA AATTAAAAGT GATCCCGGGA GATAAAGTTG TAACAGGCCC GTTTCATATG
GAAATCATGG GTATCCCGAC ACCGCTGGGC TTGCCGCTTG GTTTCTTTCC CGTAACACGC
CGCTCTAAAT CAGGTATCAT TTTCCCTACC ATCGGCGAGC AGCGCAGCAG AGGGTTCTTT
ATCAGCAATG GCGGTTACTA CTGGGCGGTG AATGATTATG TAGGGGTAAA AGTATTGGGA
GATCTCTATG CAAACAAAAG TTACCGGCTT GCAACAACAG CCAGTTACAT AAAGCGCTAT
TCCTATACCG GTACCAGCAG CATGAGCTAC AGCAAAGTAA AAGAAGGATT TGTTGACACG
GTAAAAGCAC CGCTTCTTTT TAATCTCCGT TGGAACCACG CAACCCTGGG GAATAAATCA
TCGCGTTTAT CTGCAGATGT GAATATCAGT TCCAGTAAGT TTTATGCAAC TAACAGCTAC
AACCCGGCAA GCTATCAGGC TCCTGAATTT GCATCTAATA TTTCCTGGTC AAAAGCATTC
AGAAACAGCC CGTTCAGTAT GTCTGTTGCC TTCAGACAGA ATCAGAATAC GGTGAATAAA
ACCATGAATA TTACCGCGCC GGATGTAAAT TTTTCGATGA ACCGGATCTA TCCGTTCAAA
GGCAAAAACA GCGATGGTAC CAAATGGTTT GAGAAGATTA ACATTGCCTA TAATGGAAGC
ACCAAGTACA TAATAACAAA CCAGTTGAGA AATGCATTTC TTGGAAATAC ATTTTATAGT
GATACAATTG TAAGCTTTGA CAATAATTTT CAGGACATAG TTAATAATGC TCAATGGGGT
CTTCAAAATA CAATACCCAT AAATACTACA TTTAAAGTAT TTAAATATTT TAGTTTAAAT
CCTTCTGTTA GAATTACCAA TTGGGTGTAT GCAAATAAAT TAGATTACAC AACCACTGTT
GTTAATGGGG TGGTGCAAAC AAAACAAGCT GAACAATCAA TAGAAGGGCT AAACACTGCC
TTTTCAGGAG ATTTTTCTAC AACACTAACA ACACGTATAT ATGGTTTATA CCGGTTGAAT
AATAAAATTC TCCAGGGCAT CCGCCATACA TTTATCCCTA ATTTTACCTA TACATACAGA
CCTGATCTGG TCGGATTAGA TAAAGGAAAT AAGTATTTCT ATACAAATTC TTCGGATGTA
TCACGTACAA CAGGAGAACC TATTCCGTAT TCCCGTTACC AGGGTTATAT CTATGGCGGC
CCAGGCAGCG GTACAGTAAA TAGTTTATCC TTTAGTTTTG TAAATTCATT AGAAGGTAAA
GCACGTAACC GTAAAGACAC TACCGGCCTT ACACCTACTA AAAAGATAAA ATTGCTGGAC
AACGTAAACG CAGCGGGCTC GTATAATTTC GGCGCCGATT CCATGCAATG GTCGCTTATT
ACCTGGGGCG CACAGACAAA TTTATTTGAA CGCATCAATA TTAACTTCAA CGGTACATTT
GATCCATATA TTTATATACT GGATTCTGTT TCTTCCACCA ATTCCAAACG GATCTATCAG
CACCGGATCA ATACATTAGC CAGTGAAAGA ACTGCAGAAA ATCCAAACCC TAAATTTCTG
ATATTGACAA ATTACAATGT TGCTATCAGC ACCAATCTCA ATCCAAAGGG GCAAAAAACT
ACTCAGCCTG CCAATCAGAT GAATATGCCC TCCCCTAATG GCTATACGCT TATCGGGGGA
GCTCAGTATG TAGACTTTAA CATTCCATGG AATTTAATGT TGGGATACAA TTTGAGTTAT
TCGAAACAGG GTTATGATAC AGCAGTGTAT TCGCAGGCAT TCACATTCAG CGGCGATGTT
AAAGTATCGG ATAACTGGAA AGTTAAATTT ACATCCGGCT ACGATTTTGT CAGAAAAAGT
ATCGCGTACA ATACGCGGAT AGAAATATTC AGAGACCTGC ATTGCTGGCA GATGAGTATG
AGCGTGATTC CATTCGGGCA GCAGCAATCT TTTTTCTTTA CACTCAATGC CAAGTCTTCC
CTATTGCGTG ATATGAAGTT AACGAAACGC GATGCCAATA ACCTGGGTAC GGGGTATTAG
 
Protein sequence
MIFCLLLAES INAQAPISDS LKLNFKEGVL NPITDTTTQR TAHAQSLDSL KANATDTLDI 
PKSDIETRIL YTCRDSLRMN IAEQKVYLYG DAKVTYGSRI LTAEFMEINW ATNEVNAYGL
VDSLKGKTIG KPVFKEGSDM YVAETIRYNM KSGKGIISGI VTRQGDGYIQ GGPVKKTPEA
IYVKHAIYTT CNLPHPHFSI NASKLKVIPG DKVVTGPFHM EIMGIPTPLG LPLGFFPVTR
RSKSGIIFPT IGEQRSRGFF ISNGGYYWAV NDYVGVKVLG DLYANKSYRL ATTASYIKRY
SYTGTSSMSY SKVKEGFVDT VKAPLLFNLR WNHATLGNKS SRLSADVNIS SSKFYATNSY
NPASYQAPEF ASNISWSKAF RNSPFSMSVA FRQNQNTVNK TMNITAPDVN FSMNRIYPFK
GKNSDGTKWF EKINIAYNGS TKYIITNQLR NAFLGNTFYS DTIVSFDNNF QDIVNNAQWG
LQNTIPINTT FKVFKYFSLN PSVRITNWVY ANKLDYTTTV VNGVVQTKQA EQSIEGLNTA
FSGDFSTTLT TRIYGLYRLN NKILQGIRHT FIPNFTYTYR PDLVGLDKGN KYFYTNSSDV
SRTTGEPIPY SRYQGYIYGG PGSGTVNSLS FSFVNSLEGK ARNRKDTTGL TPTKKIKLLD
NVNAAGSYNF GADSMQWSLI TWGAQTNLFE RININFNGTF DPYIYILDSV SSTNSKRIYQ
HRINTLASER TAENPNPKFL ILTNYNVAIS TNLNPKGQKT TQPANQMNMP SPNGYTLIGG
AQYVDFNIPW NLMLGYNLSY SKQGYDTAVY SQAFTFSGDV KVSDNWKVKF TSGYDFVRKS
IAYNTRIEIF RDLHCWQMSM SVIPFGQQQS FFFTLNAKSS LLRDMKLTKR DANNLGTGY