Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0718 |
Symbol | aroB |
ID | 4186016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 817309 |
End bp | 818358 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070724 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_677345 |
Protein GI | 110637138 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTG AAATACTTTT TACACAACAG ACAAAACAAA CGCTGCAGCC TTTCCTTGGA AAGTACTCAA CCGTTTGTGT GCTGGTTGAT GAGAATACAA AAAAACACTG CCTTCCGCTT ATCGCTGATC TATTCTCAAC AGAGAATATT ATCGAGATCA AAAGCGGAGA AAAAGAAAAA ACACTTGAAA CCTGTTCTGT AATCTGGTCA CAAATGACAG AGCTTGCGCT GGATCGTAAA GCGTTGCTGG TAAATCTTGG CGGCGGCGTA ATCGGTGATA TGGGCGGCTT CTGTGCTTCT ACCTACAAAC GAGGCATTGA CTTTATTCAG ATTCCTACTA CCCTCCTGTC GCAGGTAGAT GCAAGTGTTG GCGGCAAGCT GGGTATCGAC TTTACCGATG CACACGAAAA CGTTTTCAAA AATCACATCG GCGTATTTAA TGTACCCGTT GCAGTAATTA TTGATCCGAC GTTTTTACAA ACACTCGATG CAAAGGAATT GCGTTCGGGT TATGCAGAGG TCATCAAACA TTGTCTGATC GCTGATAAAG CAAAATGGAA TGAAATTAAA ACCGTAACCG ATCTGACAAA ATTAGATTGG ATGGCACTGG CAAAACATTC TGTTACAATT AAAGAAAAGA TTACGATCGA AGATCCGTTG GAAAAAGGTC TTCGTAAAAT ATTAAACTTC GGCCATACCG TTGGGCATGC CATAGAAAGC CATTTTCTAT TCATTCCGCA CAAACGTCTG CTGCATGGCG AAGCCATTGC TGCCGGTATG GTCTGTGAGT CCTGGCTTTC TGTACAAAAA GGATTTATCA CAGAAGCGGA ACATAAAGAG ATCGAAGCGT ATATTCTTTC GATTTACGGA CATACACATA TTTTATTTAC CGAGATCGAT CTGATTGTTC CGCTTACCCT TCAGGACAAG AAAAACGAAC ACGGAGCCGT ACAGTTTTCT TTATTAGAAA AAGTAGGCAC CGCTAATTAC AATATATCTT TAACTAAAGA AGAGATCACC GCATCTTTAC ACTACTATGC AAGCCTCTGA
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Protein sequence | MASEILFTQQ TKQTLQPFLG KYSTVCVLVD ENTKKHCLPL IADLFSTENI IEIKSGEKEK TLETCSVIWS QMTELALDRK ALLVNLGGGV IGDMGGFCAS TYKRGIDFIQ IPTTLLSQVD ASVGGKLGID FTDAHENVFK NHIGVFNVPV AVIIDPTFLQ TLDAKELRSG YAEVIKHCLI ADKAKWNEIK TVTDLTKLDW MALAKHSVTI KEKITIEDPL EKGLRKILNF GHTVGHAIES HFLFIPHKRL LHGEAIAAGM VCESWLSVQK GFITEAEHKE IEAYILSIYG HTHILFTEID LIVPLTLQDK KNEHGAVQFS LLEKVGTANY NISLTKEEIT ASLHYYASL
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