Gene CHU_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0718 
SymbolaroB 
ID4186016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp817309 
End bp818358 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content41% 
IMG OID638070724 
Product3-dehydroquinate synthase 
Protein accessionYP_677345 
Protein GI110637138 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTG AAATACTTTT TACACAACAG ACAAAACAAA CGCTGCAGCC TTTCCTTGGA 
AAGTACTCAA CCGTTTGTGT GCTGGTTGAT GAGAATACAA AAAAACACTG CCTTCCGCTT
ATCGCTGATC TATTCTCAAC AGAGAATATT ATCGAGATCA AAAGCGGAGA AAAAGAAAAA
ACACTTGAAA CCTGTTCTGT AATCTGGTCA CAAATGACAG AGCTTGCGCT GGATCGTAAA
GCGTTGCTGG TAAATCTTGG CGGCGGCGTA ATCGGTGATA TGGGCGGCTT CTGTGCTTCT
ACCTACAAAC GAGGCATTGA CTTTATTCAG ATTCCTACTA CCCTCCTGTC GCAGGTAGAT
GCAAGTGTTG GCGGCAAGCT GGGTATCGAC TTTACCGATG CACACGAAAA CGTTTTCAAA
AATCACATCG GCGTATTTAA TGTACCCGTT GCAGTAATTA TTGATCCGAC GTTTTTACAA
ACACTCGATG CAAAGGAATT GCGTTCGGGT TATGCAGAGG TCATCAAACA TTGTCTGATC
GCTGATAAAG CAAAATGGAA TGAAATTAAA ACCGTAACCG ATCTGACAAA ATTAGATTGG
ATGGCACTGG CAAAACATTC TGTTACAATT AAAGAAAAGA TTACGATCGA AGATCCGTTG
GAAAAAGGTC TTCGTAAAAT ATTAAACTTC GGCCATACCG TTGGGCATGC CATAGAAAGC
CATTTTCTAT TCATTCCGCA CAAACGTCTG CTGCATGGCG AAGCCATTGC TGCCGGTATG
GTCTGTGAGT CCTGGCTTTC TGTACAAAAA GGATTTATCA CAGAAGCGGA ACATAAAGAG
ATCGAAGCGT ATATTCTTTC GATTTACGGA CATACACATA TTTTATTTAC CGAGATCGAT
CTGATTGTTC CGCTTACCCT TCAGGACAAG AAAAACGAAC ACGGAGCCGT ACAGTTTTCT
TTATTAGAAA AAGTAGGCAC CGCTAATTAC AATATATCTT TAACTAAAGA AGAGATCACC
GCATCTTTAC ACTACTATGC AAGCCTCTGA
 
Protein sequence
MASEILFTQQ TKQTLQPFLG KYSTVCVLVD ENTKKHCLPL IADLFSTENI IEIKSGEKEK 
TLETCSVIWS QMTELALDRK ALLVNLGGGV IGDMGGFCAS TYKRGIDFIQ IPTTLLSQVD
ASVGGKLGID FTDAHENVFK NHIGVFNVPV AVIIDPTFLQ TLDAKELRSG YAEVIKHCLI
ADKAKWNEIK TVTDLTKLDW MALAKHSVTI KEKITIEDPL EKGLRKILNF GHTVGHAIES
HFLFIPHKRL LHGEAIAAGM VCESWLSVQK GFITEAEHKE IEAYILSIYG HTHILFTEID
LIVPLTLQDK KNEHGAVQFS LLEKVGTANY NISLTKEEIT ASLHYYASL