Gene CHU_0668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0668 
Symbol 
ID4185671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp766587 
End bp767723 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content39% 
IMG OID638070674 
Producthypothetical protein 
Protein accessionYP_677295 
Protein GI110637088 
COG category[R] General function prediction only 
COG ID[COG3489] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0864322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TAATTATTTT GGCTATAAGT ATCTGCATCA GTGTATGTGC CTGTAAACCG 
TCCAAAGATG AAACGTCATC TTTAAAAACT GCCGATAGAA AACCGTTGGT TACCAATTTG
GGCAATAATG TAATCCTTCC GAGATACGTT GCGTTGAATA CGTCTGTTAA CGCGTTCGAT
TCTGAAGTGC AGATTTTTAC AGCAGCACCA ACGATAGAAA ATCTAACATC CTTACGGATT
AAATTTTACC AGGCATATAT CGATTGGGAA TATGTAGCAT GTTTTGAATT CGGCCCTGCA
GCAGCAAGTA CGGTTAATCT GGGTACAAAG ACCGTTAATG CTTTTCCTGC AGATACAGCT
GTTATAAAAA ATAAAATTGT ACAGGGCGTT ACAGCCATTC CGCCCACAAA CAGCGCTATG
TACTCAGGTT TTCCCGCTAT TGATTATTTG TTGTTTGCCA AGAGCCTGAC TGCACAACAG
ATTGTTGATT CGTTTACGGT ATCTTCTACA GCAGTTAAAA GATGTAATTA TCTTAAAACA
GTAAGCTCAG ATTTAAAAGC AAGAATAAAC ACAACGTATA CAAACTGGAC AGCTTCCGGT
GCAAATTTTA TTTCCTTATA TACAAACAGT ACCGGCATAG ATCTTGGAAG TGCAACGTCT
CAGACAGTAA ACATGCTGGT TGCAGATGTT GAAAATATTA AGAACTTTAA ATTAGGGATT
CCTTTAAATA TTATACAGAA TGTTGTTGTG GGCGACGGTT CTACAGTGAA TCCATTCAAG
TGTGAAGGTT ATCATTCAGA TTCTTCTCTG GTATTAGCTA AAGCCAGCAT AGAGTCGCTG
CGTAAGCTAT ATCTGGGCAT TGGCGCAGAT GGTACAGATG GAGAAGGGTT TGATAATTAC
CTGGAAGCCA TCGACCGTTC CGGATTAAAT GTGCAGATTA AAAATCAGAT TGCACTTTTG
CAGGCAAAAT TGGATGCAAT ACCTGCACCT ATTTCAATTG CTATAAAAAA TCCTGCCGGT
AAACAGGCAG TAAACGAAGC TTACACGGAA ACATTACATC TGTTGGTATT GTTAAAAGTT
GATATGGCAT CAGCAATCGG CGTTATGATT TCATACGGCG ATACAGACGG CGATTAA
 
Protein sequence
MNKIIILAIS ICISVCACKP SKDETSSLKT ADRKPLVTNL GNNVILPRYV ALNTSVNAFD 
SEVQIFTAAP TIENLTSLRI KFYQAYIDWE YVACFEFGPA AASTVNLGTK TVNAFPADTA
VIKNKIVQGV TAIPPTNSAM YSGFPAIDYL LFAKSLTAQQ IVDSFTVSST AVKRCNYLKT
VSSDLKARIN TTYTNWTASG ANFISLYTNS TGIDLGSATS QTVNMLVADV ENIKNFKLGI
PLNIIQNVVV GDGSTVNPFK CEGYHSDSSL VLAKASIESL RKLYLGIGAD GTDGEGFDNY
LEAIDRSGLN VQIKNQIALL QAKLDAIPAP ISIAIKNPAG KQAVNEAYTE TLHLLVLLKV
DMASAIGVMI SYGDTDGD