| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0655 |
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| Symbol | dbpA |
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| ID | 4185658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 752329 |
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| End bp | 753669 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638070661 |
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| Product | ATP-independent RNA helicase |
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| Protein accession | YP_677282 |
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| Protein GI | 110637075 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.885084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA AGCCCACCAT TGAGCAACTG CTCAACAATG TATCCATCGA ATCTTTAAAT
GATATGCAGG AAGATTCGCT TGCGGCAAAT GCAAAAGCAA GCGATGTCAT ACTGCTGTCT
CCAACCGGTT CGGGAAAAAC ACTCGGTTTT CTGTTACCTG TTTTTCAACA GCTTTCTGTT
TCATCAAACT CTATACAGGC ACTTGTTTTA GTGCCTTCAA GAGAATTGGC CTTGCAGATT
GAAAGTGTAT TTAAAAGTCT GAAAACAGGC TTTAAAGTAA CATGCTGTTA TGGCGGCCAT
CCGATGGATG TAGAAGAAAA TAACCTGGCA CAATCGCCGG CCTTATTGAT CGGTACACCG
GGAAGAATTG TTGATCATAT CAATCGTAGA AATATTAACC TGGACGATGT TAAAACATTG
GTGCTGGATG AATTTGACAA ATCGCTTGAG ATGGGTTTTC AGGAAGATAT GGCAATCATC
ATCGGCAGAT TAACGGGAAT TAAAAAACGG ATTTTAACGT CTGCTACGCA GGCAATCAAA
ATACCTGATT TTACCGGCAT GCAATCGCCT GTAACCTTAA ATTACATCAC CGGGCAGGCA
AGCGGCTTAT CTGTTAAAAC AGTGCTTTCA GATACGAAAG ATAAATTTGA TACCCTGTTA
CGTTTGCTTT GTCAGATCGG CAATGAATCG GTTATTGTCT TTTGCAATCA GCGTGATGAG
GTAGAAAATG TATGTGCATA TTTAACTGAA CATGGTATTA TAAATAATAA TTTTCATGGA
GGCCTGGAAC AGCGCTACAG AGAAAGTACA CTTACTAAAT TCAGAAACGG AAGCACAAAT
GTACTTGTAA CAACAGACCT TGCTGCGAGA GGTCTGGATA TACCGGATGT AAAGCATGTG
ATACATTATC AGATGCCGCA TAAGATTGAT GCCTTTACAC ATCGTAACGG CCGTACAGCG
CGTATGGGTT CTACCGGTAA TGCATACATG CTGCTGCATA AAGATGTGTT GCTGCCTGAT
TACATTACAA GCAAACCGGA TATTTTGAAA CTTTCCGATC AGAAGGTAAA ACCATTGCTG
CCGCAGTGGG AAACACTATT CATAAGTGCA GGTAAAAAAG ATAAGATCAA TAAAATAGAT
ATTGTTGGTT TTCTTTCTAA AAAAGGTTTG CTGGAAAAAG ATGAATTGGG ATTGATAGAA
GTAAAAGATC AGTTTGCTTA TGCAGCAGTG AAACGCAATA AAGTAGAATC GGTTATAAAA
CTGGTGAAAG AAGAAAAAAT TAAAGGCCGT AAGGTAAAAA TCGAAGTAGC GAGAGAGACA
CCAAAATTTG AAGCAGAATA A
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| Protein sequence | MSDKPTIEQL LNNVSIESLN DMQEDSLAAN AKASDVILLS PTGSGKTLGF LLPVFQQLSV
SSNSIQALVL VPSRELALQI ESVFKSLKTG FKVTCCYGGH PMDVEENNLA QSPALLIGTP
GRIVDHINRR NINLDDVKTL VLDEFDKSLE MGFQEDMAII IGRLTGIKKR ILTSATQAIK
IPDFTGMQSP VTLNYITGQA SGLSVKTVLS DTKDKFDTLL RLLCQIGNES VIVFCNQRDE
VENVCAYLTE HGIINNNFHG GLEQRYREST LTKFRNGSTN VLVTTDLAAR GLDIPDVKHV
IHYQMPHKID AFTHRNGRTA RMGSTGNAYM LLHKDVLLPD YITSKPDILK LSDQKVKPLL
PQWETLFISA GKKDKINKID IVGFLSKKGL LEKDELGLIE VKDQFAYAAV KRNKVESVIK
LVKEEKIKGR KVKIEVARET PKFEAE
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