Gene CHU_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0594 
Symbol 
ID4185794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp692169 
End bp694088 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content38% 
IMG OID638070599 
Productsiderophore biosynthesis protein 
Protein accessionYP_677221 
Protein GI110637014 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00413673 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTGGA TGCACAATTT GATATTGCTT TCGTATGCGC TTTATTATTT CTTTCAATTC 
TTACAGTTAC AAGTATTTCA TTTAAACGTA AAACACATAG ATATGAATCA TTCCGATAAT
TTGATAAGCC AGGATTTTCA GACGGGAATC AGGCATCTGA AAAAAGATGT CTGGAACCTG
GCAAACCGTA AACATATAAC AAAAGTATTT GCAGAGTTTT TACATGAATG CCTGATTGAT
CCGGTTCAGA CAAAAACAGA AACAGCTCTT GTTCATTTCC GTTTAGCTAC AGACAGCCCT
GCTGTTTATT ATACCTTTTC AGGCGAATAC CGTGCAATGG ACTACTGGCA CCTGGATCCG
AATTCAGTTG TTAAGCATGT CGATGGTAAA ACTCAGCCTG CGCTGGATGT TATTCAGTTT
TTTTTAGATA TAAAAGAAAC GCTTGGTGTT AAGCCACTAA CGCTTTCAAA ATTCATTGAA
GAAACATACA ATACCTTATA TGCGGATGCC TATATTTTAG CACAAGGGAG AATCGGTGCG
CATTTATTGG TCGATGCACC ATATACAATT ATTGAGCATC AAATGGATGG GCATCCTTGG
GCCACGGTAA ATAAAGGGAG GATTGGTTTC AGCTACGAAG ATTATTTAGA CTTTGTACCT
GAAGCAAACA AGATGACAAC CTTATTCTGG CTGGGCGTTC ATAAAAGCAA AGCTTCGTAC
GCACATACAA AAGAATATAA CTATGAACGT CTTGTGCAGG AAGAGTTAGG TATTGATCTG
CAGGAAGAAT TTAATGCAGT TCTTTTTTCG CATGACGTTA ATCCGGAGGA ATATTTATTT
TTACCCGTAC ACGAGTGGCA ATGGAAACAC AAACTGACGT TTTTATTTGC AGGGGATATT
GCCAATCAAT ACATTATTCC GCTAGGCAAA GGTAATGACA GCTATACGCC GCAGCAGTCT
ATTCGTACAT TTTTCAATAC AGATAAACCG GAGAAGCTTT ATGTCAAGAC AGCAATTTCT
ATATTAAATA CTTCTGTATA CCGGGGACTT TCACCGGCAA AACTTTCTGT TGCACCTTTT
GTAACTACCT GGGTGAAAAA TAAACTGGAT ACTGATCCGG TTTTAAAGCG TCTTGGATTT
ACCTTGCTTG GAGAAGTTGC AACCATTGGT TACAAGCACA ATCACTATGA GCAGGTTGAA
AACGGTCCGT ATCATTATAA GGAATTACTT GGTGCCATTT GGAGAGAAAG CGCCACAAAC
TATCTGAACG AAGGTGAACG GATCATGACC ATGGCTTCGT TATTATATGT GGATGAAAAC
GGAAAATCAT TTACCGCGGA ACTTATCCGT AAGTCGGGCT TAACACCGGA AGCATGGTTA
AAAGTATATT TGAAATCATA CCTTACACCT ATATTACATA TTTTCTATCA GCATAAGTTT
TTCTTTAGCC CGCATGGTGA AAATACTATT TTGGTAATAC AGGATTATGT GCCGGTACGC
ATTATCATAA AAGATTTTGT TGAAGAGATT GTGTTGACAC AGGACGGCAG AAATGAAGCA
CCTGAAGAAG CAAAAAATAT CTTGAGAGAT ATTGATGATG AATATGCTAC ATTGTTTATT
TTATCCGGCG TGTTTGATGG CGTGTTTCGT TATTTATCCA ATGTATTCCA AAGTTATGTT
GGTCTGGATG AAAAAATATT CTGGCAGCAT GTAGCGCAAG TAATTGATGG GTATCAGAAA
GATCATCCGG AATTTAAAGA ACGGTATGAA AAGTTTGATC TGTTTATTCC GGAATTTATT
CGTGTATGTA TCAATCGGGT GCGTTTGTTA ACATACGGCT ACTCTGAAGA AGCTTCGATT
CCTATGCCGG AGATCTGCGG AACACTCATT AATCCTGCTG CTATAAATAG AAAAAAATAA
 
Protein sequence
MAWMHNLILL SYALYYFFQF LQLQVFHLNV KHIDMNHSDN LISQDFQTGI RHLKKDVWNL 
ANRKHITKVF AEFLHECLID PVQTKTETAL VHFRLATDSP AVYYTFSGEY RAMDYWHLDP
NSVVKHVDGK TQPALDVIQF FLDIKETLGV KPLTLSKFIE ETYNTLYADA YILAQGRIGA
HLLVDAPYTI IEHQMDGHPW ATVNKGRIGF SYEDYLDFVP EANKMTTLFW LGVHKSKASY
AHTKEYNYER LVQEELGIDL QEEFNAVLFS HDVNPEEYLF LPVHEWQWKH KLTFLFAGDI
ANQYIIPLGK GNDSYTPQQS IRTFFNTDKP EKLYVKTAIS ILNTSVYRGL SPAKLSVAPF
VTTWVKNKLD TDPVLKRLGF TLLGEVATIG YKHNHYEQVE NGPYHYKELL GAIWRESATN
YLNEGERIMT MASLLYVDEN GKSFTAELIR KSGLTPEAWL KVYLKSYLTP ILHIFYQHKF
FFSPHGENTI LVIQDYVPVR IIIKDFVEEI VLTQDGRNEA PEEAKNILRD IDDEYATLFI
LSGVFDGVFR YLSNVFQSYV GLDEKIFWQH VAQVIDGYQK DHPEFKERYE KFDLFIPEFI
RVCINRVRLL TYGYSEEASI PMPEICGTLI NPAAINRKK