Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0594 |
Symbol | |
ID | 4185794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 692169 |
End bp | 694088 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070599 |
Product | siderophore biosynthesis protein |
Protein accession | YP_677221 |
Protein GI | 110637014 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00413673 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTGGA TGCACAATTT GATATTGCTT TCGTATGCGC TTTATTATTT CTTTCAATTC TTACAGTTAC AAGTATTTCA TTTAAACGTA AAACACATAG ATATGAATCA TTCCGATAAT TTGATAAGCC AGGATTTTCA GACGGGAATC AGGCATCTGA AAAAAGATGT CTGGAACCTG GCAAACCGTA AACATATAAC AAAAGTATTT GCAGAGTTTT TACATGAATG CCTGATTGAT CCGGTTCAGA CAAAAACAGA AACAGCTCTT GTTCATTTCC GTTTAGCTAC AGACAGCCCT GCTGTTTATT ATACCTTTTC AGGCGAATAC CGTGCAATGG ACTACTGGCA CCTGGATCCG AATTCAGTTG TTAAGCATGT CGATGGTAAA ACTCAGCCTG CGCTGGATGT TATTCAGTTT TTTTTAGATA TAAAAGAAAC GCTTGGTGTT AAGCCACTAA CGCTTTCAAA ATTCATTGAA GAAACATACA ATACCTTATA TGCGGATGCC TATATTTTAG CACAAGGGAG AATCGGTGCG CATTTATTGG TCGATGCACC ATATACAATT ATTGAGCATC AAATGGATGG GCATCCTTGG GCCACGGTAA ATAAAGGGAG GATTGGTTTC AGCTACGAAG ATTATTTAGA CTTTGTACCT GAAGCAAACA AGATGACAAC CTTATTCTGG CTGGGCGTTC ATAAAAGCAA AGCTTCGTAC GCACATACAA AAGAATATAA CTATGAACGT CTTGTGCAGG AAGAGTTAGG TATTGATCTG CAGGAAGAAT TTAATGCAGT TCTTTTTTCG CATGACGTTA ATCCGGAGGA ATATTTATTT TTACCCGTAC ACGAGTGGCA ATGGAAACAC AAACTGACGT TTTTATTTGC AGGGGATATT GCCAATCAAT ACATTATTCC GCTAGGCAAA GGTAATGACA GCTATACGCC GCAGCAGTCT ATTCGTACAT TTTTCAATAC AGATAAACCG GAGAAGCTTT ATGTCAAGAC AGCAATTTCT ATATTAAATA CTTCTGTATA CCGGGGACTT TCACCGGCAA AACTTTCTGT TGCACCTTTT GTAACTACCT GGGTGAAAAA TAAACTGGAT ACTGATCCGG TTTTAAAGCG TCTTGGATTT ACCTTGCTTG GAGAAGTTGC AACCATTGGT TACAAGCACA ATCACTATGA GCAGGTTGAA AACGGTCCGT ATCATTATAA GGAATTACTT GGTGCCATTT GGAGAGAAAG CGCCACAAAC TATCTGAACG AAGGTGAACG GATCATGACC ATGGCTTCGT TATTATATGT GGATGAAAAC GGAAAATCAT TTACCGCGGA ACTTATCCGT AAGTCGGGCT TAACACCGGA AGCATGGTTA AAAGTATATT TGAAATCATA CCTTACACCT ATATTACATA TTTTCTATCA GCATAAGTTT TTCTTTAGCC CGCATGGTGA AAATACTATT TTGGTAATAC AGGATTATGT GCCGGTACGC ATTATCATAA AAGATTTTGT TGAAGAGATT GTGTTGACAC AGGACGGCAG AAATGAAGCA CCTGAAGAAG CAAAAAATAT CTTGAGAGAT ATTGATGATG AATATGCTAC ATTGTTTATT TTATCCGGCG TGTTTGATGG CGTGTTTCGT TATTTATCCA ATGTATTCCA AAGTTATGTT GGTCTGGATG AAAAAATATT CTGGCAGCAT GTAGCGCAAG TAATTGATGG GTATCAGAAA GATCATCCGG AATTTAAAGA ACGGTATGAA AAGTTTGATC TGTTTATTCC GGAATTTATT CGTGTATGTA TCAATCGGGT GCGTTTGTTA ACATACGGCT ACTCTGAAGA AGCTTCGATT CCTATGCCGG AGATCTGCGG AACACTCATT AATCCTGCTG CTATAAATAG AAAAAAATAA
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Protein sequence | MAWMHNLILL SYALYYFFQF LQLQVFHLNV KHIDMNHSDN LISQDFQTGI RHLKKDVWNL ANRKHITKVF AEFLHECLID PVQTKTETAL VHFRLATDSP AVYYTFSGEY RAMDYWHLDP NSVVKHVDGK TQPALDVIQF FLDIKETLGV KPLTLSKFIE ETYNTLYADA YILAQGRIGA HLLVDAPYTI IEHQMDGHPW ATVNKGRIGF SYEDYLDFVP EANKMTTLFW LGVHKSKASY AHTKEYNYER LVQEELGIDL QEEFNAVLFS HDVNPEEYLF LPVHEWQWKH KLTFLFAGDI ANQYIIPLGK GNDSYTPQQS IRTFFNTDKP EKLYVKTAIS ILNTSVYRGL SPAKLSVAPF VTTWVKNKLD TDPVLKRLGF TLLGEVATIG YKHNHYEQVE NGPYHYKELL GAIWRESATN YLNEGERIMT MASLLYVDEN GKSFTAELIR KSGLTPEAWL KVYLKSYLTP ILHIFYQHKF FFSPHGENTI LVIQDYVPVR IIIKDFVEEI VLTQDGRNEA PEEAKNILRD IDDEYATLFI LSGVFDGVFR YLSNVFQSYV GLDEKIFWQH VAQVIDGYQK DHPEFKERYE KFDLFIPEFI RVCINRVRLL TYGYSEEASI PMPEICGTLI NPAAINRKK
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