Gene CHU_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0578 
Symbolfrr 
ID4184429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp675009 
End bp675569 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID638070583 
Productribosome recycling factor (ribosome releasing factor) 
Protein accessionYP_677205 
Protein GI110636998 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.552167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA TTAATTTATA CTTAGACGAC GCAAAAGATA GCATGCAAAA GGCTATCAAA 
CATACAGAGC TTGAATTATC CAAGATCCGT GCGGGTAAAG CTTCTCCGAA TATGTTTGAC
GGGATCATGG TAGATTACTA CGGTTCATCT ACACCGTTGG CGCAGGTTGC AACGGTTTCT
GTTCCGGAGC CGCGTTCGAT CACGATCAAG GCATACGAAA AATCCATGGT AACAACGATT
GAAAAAGCGA TTCGTGATGC AAACATGGGT TTCAATCCGC AGAACGATGG AGATGTGATC
CGTATCAACG TACCGCCGCT TACAGAAGAG CGACGCAGAG ACCTGGTAAA ACAGACAAAG
GCAGAAGGCG AGAGCGGTAA AGTACGCATC CGTAAGATCC GTCAGGAGAC AAACGATGAG
TTGAAAAAAT TATTAAAGGA CGGTGCTTCT GAAGACGAAG TAAAAAGAGC GGAAGAAGTA
GTGCAGGCCT TAACCAACGA TACCTCTGCA AAGTTAGAAG CATTGATCGC TGCTAAAGAA
AAAGAATTGA TGACAGTGTA A
 
Protein sequence
MEEINLYLDD AKDSMQKAIK HTELELSKIR AGKASPNMFD GIMVDYYGSS TPLAQVATVS 
VPEPRSITIK AYEKSMVTTI EKAIRDANMG FNPQNDGDVI RINVPPLTEE RRRDLVKQTK
AEGESGKVRI RKIRQETNDE LKKLLKDGAS EDEVKRAEEV VQALTNDTSA KLEALIAAKE
KELMTV