| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0495 |
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| Symbol | |
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| ID | 4186244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 576423 |
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| End bp | 577937 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638070502 |
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| Product | Na+ linked D-alanine glycine permease component |
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| Protein accession | YP_677124 |
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| Protein GI | 110636917 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.304972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAGTTA CACCACTCTT TTTTTTGTAT CCTATTCAAA TTCTCCCTTA TCTTTATACA
ATGGAAGAAA CACAAAGCCT GGATGCCGCT ATCAATGCGT TTATCAGTCC GGTCTCCGAT
TTTATTACGT CAATTATTTT TTATTCGATT CCGGTTTCGG GTGTTGAAGT ACCCTTGATT
GTATTGTGGC TTATTACCGC TGGTTTGTTT TTCTTTTTTT ATCTCAAAGC AATTAATGTT
ACACGCCTTT GGCTGGCTAT CAATATTGTC CGCGGAAAAT ATGATGAACC CGATTCGAAA
GGCGAGGTCA ATCATTTTCA GGCCCTGGCT ACAGCGTTGT CGGGTACGGT TGGTTTAGGT
AATATTTCCG GCGTTGCTGT TGCGATTACC CTGGGCGGGC CGGGTGCTAC GTTCTGGATG
ATTGTTGCAG GTTTCTTTGG TATGATGACA AAGTTTGCAG AATGCACCTT AGGCGTAAAA
TACCGTCAGG TAAGTGCAGA CGGTATTGTG TCGGGCGGAC CGATGTATTT TCTGCGCGAC
GGATTGAAAG CAAAAGGTTT TCCGGTATTG GGAAAAGTGC TTGCCGTATT GTTTGCTGTC
ATGTGTATCG GCGGCGCATT GGGCGGCGGC AACATGTTCC AGAGCAATCA GGTAACGGCG
CAGCTGGTAG CAGAAACAGG CGGCAGCGCA AGCTGGTTCG CAAACAACCT GTGGTTGCCC
GGGTTGATCT TGAGTTTACT CGTAGGCAGT GTGATCATTG GCGGATTAAA ATCCATTGCA
CATGTAACCG AAAAAATTGT TCCCTTTATG TGTGCCTTAT ATGTAGCGGC TTGCCTGTAT
ATCATCTTTG CAGCCTACGA TAAAATTCCA CAGACTTTTT TACTGATCAT GAATGGGGCC
TTCCATGCAG ATGCCATGTA TGGCGGTGTG CTGGGTGTGC TGATCACCGG TTTCCGGAGA
GCGTCTTTTT CAAATGAAGC AGGTGTCGGT TCTGCCTCCA TTGCGCATTC GGCGGTGAAG
ACCAATGAAC CCGTTACAGA AGGGCTTGTA TCTTTGCTGG AACCGTTTCT GGATACGATT
GTGATCTGCA CCATGACGGC GGTAGTGATT GTGATTACAG GCGCGTATCA TGATGTAGGC
AAAGACGGCA TCACGCTTAC CTCGCATGCA TTCTCCAGTA CCGTAAACTG GTTTCATTAC
ATTCTTTCCA TCAGTGTCTT TCTGTTTGCT TTCGCCACGA TGATTTCCTG GTCGTATTAT
GGTTTGAAGT CGTGGGGGTA TCTGTTTGGT GCCGGCAAGA CTTCCGAACT GATCTATAAA
TGTATGTATT GCTTTTTTAT CATCGTAGGG TCATCCATGA GCCTTACGAA AGTAGTAGAC
TTTTCAGATG CCATGATTTT TTCCATGAGC ATTTTTAACA TCATTGGTTT GTACCTGCTG
GCGGGGGAGC TTAAGCAGGA CATGAATCAG TACTTACATA AAATCGATAC CGGAATTATC
AAGAAACAAC CGTAA
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| Protein sequence | MLVTPLFFLY PIQILPYLYT MEETQSLDAA INAFISPVSD FITSIIFYSI PVSGVEVPLI
VLWLITAGLF FFFYLKAINV TRLWLAINIV RGKYDEPDSK GEVNHFQALA TALSGTVGLG
NISGVAVAIT LGGPGATFWM IVAGFFGMMT KFAECTLGVK YRQVSADGIV SGGPMYFLRD
GLKAKGFPVL GKVLAVLFAV MCIGGALGGG NMFQSNQVTA QLVAETGGSA SWFANNLWLP
GLILSLLVGS VIIGGLKSIA HVTEKIVPFM CALYVAACLY IIFAAYDKIP QTFLLIMNGA
FHADAMYGGV LGVLITGFRR ASFSNEAGVG SASIAHSAVK TNEPVTEGLV SLLEPFLDTI
VICTMTAVVI VITGAYHDVG KDGITLTSHA FSSTVNWFHY ILSISVFLFA FATMISWSYY
GLKSWGYLFG AGKTSELIYK CMYCFFIIVG SSMSLTKVVD FSDAMIFSMS IFNIIGLYLL
AGELKQDMNQ YLHKIDTGII KKQP
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