Gene CHU_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0485 
SymbolnatA 
ID4185470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp566384 
End bp567289 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content44% 
IMG OID638070492 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_677114 
Protein GI110636907 
COG category[R] General function prediction only 
COG ID[COG4152] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA TACTTAAACT GGAAGCGGTT ACAAAAATAT TTGGCTCCTA CACAGCCATT 
GAGAGCGTAT CTCTGTCTCT TAAGAAAAAC AGTGTGCTTG GTTTGCTTGG TCCGAATGGC
GCGGGAAAAA CAACTTTGCT GCGCCTGATT ACGCAGATTG TGCTGCCTGA TAGCGGACAA
TTATTTTTTA ACGGCGAACA GCTGCAGGAA GCGCACCGCA CAAAGATGGG CTACCTGCCT
GAAGAGCGCG GCCTGTATCG TAAGATGCGC GTGCAGGAAC AATTGATCTA CTTCGCGCAA
CTTCGTGGTT TGTCTCCGCG TGAAGCAAAG CACCAAAGCA GGGACTGGCT GAAGCGTCTT
GAAATAGAAC ACCTGCAGAG TCAGGTACTG GAAACACTTT CAAAAGGTCA GCAGCAGAAG
ATTCAATTTA TTTCAGCAGT AGTGCATCAG CCCGAATTGT TGATTCTGGA TGAACCGTTC
AGCGGCTTTG ATCCGGCAAA TGCAGAGGTA ATTAAAAAAG AAATTCAGGC ATTGCAGCGT
TCCGGTACTA CCATTATTTA TTCTACACAC CGCATGGATA CAGTAGAAGA TGTATGTACA
GAACTGGTAT TGATCAATCA GGCAAAAATA GTATTGCAGG GAGAACCGCA TGCAATACGC
AAACAGTTCG ATAAAGGCTA TATACGGCTG ATCTACAGCG GAACCTTGCC CGATTCTGCA
AAGGCAGGCA TTATAGAGCA GAAACAACTT ACGGATGTAA AAGCATCGTA TGTACTTTCC
TCCGCATTAG ATAAAAAGAT GTTATTGAGC CTGCTGATTG AGCAGGGAGA GGTACATGCA
TTTGAAGAAT ATTTACCAAG CATGTATGAA CTGTTTTTAG AACACGTAAA CAAACCGATG
GTATGA
 
Protein sequence
MSEILKLEAV TKIFGSYTAI ESVSLSLKKN SVLGLLGPNG AGKTTLLRLI TQIVLPDSGQ 
LFFNGEQLQE AHRTKMGYLP EERGLYRKMR VQEQLIYFAQ LRGLSPREAK HQSRDWLKRL
EIEHLQSQVL ETLSKGQQQK IQFISAVVHQ PELLILDEPF SGFDPANAEV IKKEIQALQR
SGTTIIYSTH RMDTVEDVCT ELVLINQAKI VLQGEPHAIR KQFDKGYIRL IYSGTLPDSA
KAGIIEQKQL TDVKASYVLS SALDKKMLLS LLIEQGEVHA FEEYLPSMYE LFLEHVNKPM
V