| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0459 |
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| Symbol | |
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| ID | 4186326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 539121 |
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| End bp | 540866 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070466 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_677088 |
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| Protein GI | 110636881 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.893142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATT ATTTACTTTT CTTATTCCAC ATCGGGATTT TATTATCTGT TTCATCACCC
CTTCATGCAC AATATGTTTC CATTCCGGAT GCCAATTTCA GGGCTTATCT GGAAAGCAGG
TTCCCATCCT GTATGCAGGC AGGGAAGATG GATACAACAT GTATAGACAT AATTACTAAT
AAACAGATAG ACGTTCCCAG TCTGGCCATT TCAAACCTAA GCGGCATTCA ATATTTTGAT
CAGTTAGAAC GTTTGAATTG TGAAAACAAT ACACTTACTT TTTTACCGCC ATTACCAGTC
AGCTTAAAAG ATTTGTCATG CGGGAGCAAT AAACTGATTG TATTACCTGC ACTGCCGCCG
TCGTTGCTTA ATTTATTCTG CGGCATTAAT CAATTGACAT CATTGCCTTA TTTACCAATG
GCATTAGAAA ATTTAGCTTG TAATGATAAT AAACTAACTC TTTTACCGGA TTTACCTGAC
TCACTTATTT ATTTATACTG TTACAATAAT CAGCTGCAAT CTTTACCAAG GTTGCCGCAA
TCCCTTACTC ATATAGCTTG CTTGCATAAT CAATTAACCA CGTTGCCGGC ATTGCCGGAA
TCGTTACGTT ATTTACGGAG TGAATACAAT CAGCTTACCA GTTTGCCTGT CTTGCCGAGT
GCATTATATG AAATAAATGT AGACCATAAT TTGTTAACTG TTCTTCCGTC TTTGCCACAA
GGATTAGATA ATTTAAGCTG CTCTGAAAAT CCAATTGAAC AGCTTCCTTT GTTACCAGCC
TCCTTACGTT ATCTTACTTG CAGGAATAGC TTGTTAACCT CGCTTCCTTA TTTACCTTAC
GGCTTAGAGT CACTAAGATG CGATAGAAAT AAAATTACAA TCTTACCCAA TCTTCCTGAA
ACGCTTATAA CACTTTTATG TAATCAGAAT GCGATTACCT GCCTGCCCGT ATTGCCAGAT
GCTTTAACTA TCTTAGTTAC GGATACGCTG TGCCGGCCAA ACCTACCTTC AAATCTCAAA
ACCAATATTC CTTTAACAAC TCCGCTCTGT TCGGCCTTAA CCTTTAGCCA TACACGTGTA
TGTGTTGGGG ACTCTACAAG CTTTGAACTG AAAGATACGA ACTGCTATGC GTTCCTGTGG
GACTTTGATG ATCCGGTTAC AGGCGCGCAG AATACTTCAA CCCTGCAAAG CCCGAAACAT
TTATTCTCTA AGCCGGGTAC ATTCCAGGTA AAGCTGATAA GCTATGTTTC TGATCCGGCC
ACAGTGATTA CACAAACGGT AACGGTAGAT AAACTCCCGC GCATTGATTT CGGAAACGAT
CACAGCATGT GTCCGGATGA GAACATTACC CTGAATGCAG GCGACGGTTT TGAAACATAC
CGCTGGCAGG ATGGATCGGA TGCGCAGATC TATGCGGTAA AAACTGCCGG TACGTATACG
GTAACAGCTA CGAATGCTTG TGGCACAGTG GCAGATGCGA TTCACCTGAG TTCGTATTCA
TTAATACTCC CGAATCTGTT TACACCCAAT AAAGACGGCT ATAACGAAAC ATTTGAGGTT
AAAGGTACAA ACGGAGACTA TGGAAGTTTA GAGGTTTATA ACGCCTGGGG TGCACAGGTA
TTCGGTGCAG AAAGATATTA TAACAACTGG AACGGGGAAG GGCTTTCCGA AGGTGTATAT
TACTATTCCT TTACCTTGAA AAACTGTCCG GTGCAAAAAG GCTGGGTACA GATCATACGG
CGGTAA
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| Protein sequence | MRHYLLFLFH IGILLSVSSP LHAQYVSIPD ANFRAYLESR FPSCMQAGKM DTTCIDIITN
KQIDVPSLAI SNLSGIQYFD QLERLNCENN TLTFLPPLPV SLKDLSCGSN KLIVLPALPP
SLLNLFCGIN QLTSLPYLPM ALENLACNDN KLTLLPDLPD SLIYLYCYNN QLQSLPRLPQ
SLTHIACLHN QLTTLPALPE SLRYLRSEYN QLTSLPVLPS ALYEINVDHN LLTVLPSLPQ
GLDNLSCSEN PIEQLPLLPA SLRYLTCRNS LLTSLPYLPY GLESLRCDRN KITILPNLPE
TLITLLCNQN AITCLPVLPD ALTILVTDTL CRPNLPSNLK TNIPLTTPLC SALTFSHTRV
CVGDSTSFEL KDTNCYAFLW DFDDPVTGAQ NTSTLQSPKH LFSKPGTFQV KLISYVSDPA
TVITQTVTVD KLPRIDFGND HSMCPDENIT LNAGDGFETY RWQDGSDAQI YAVKTAGTYT
VTATNACGTV ADAIHLSSYS LILPNLFTPN KDGYNETFEV KGTNGDYGSL EVYNAWGAQV
FGAERYYNNW NGEGLSEGVY YYSFTLKNCP VQKGWVQIIR R
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