Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0378 |
Symbol | |
ID | 4183439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 449061 |
End bp | 449780 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070386 |
Product | hypothetical protein |
Protein accession | YP_677008 |
Protein GI | 110636801 |
COG category | [S] Function unknown |
COG ID | [COG3361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0504645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCAC CATTCCTTAC AGCCCAATGG AGAAAATTGA TTTTAGCGAA CTATGCAGTA GATCCTGAAA TTTTAAAACC CTATTTACCT GAGCATACCG AACTTGATTT ATGGAATAAT ACCTGTTATG TATCGGTTGT AGGTTTTTTA TTTGATGCCG TAAAGATTAA AGGGTTTACC ATACCAAACC ACCATTCTTT TCCGGAGGTT AATCTGCGCT TTTATGTGCG TTATGAAGAC AATAAAGAAT GGAAGCGTGG TGTGGTTTTC ATCAAAGAAA TTGTACCTAA AACCATGGTA ACATTTATTG CCAACACGGT ATACGGCGAA AATTATCAGA CACTTCCGAT GCGCCATCAA TGGGACATGC TGGAGAACGA GCAGCGGATT GAATACGAAT GGAAAGTAAA TAATAAATGG AATTATTTAC GCGTGAAAGC AGGTATTGAA CCTGTAGATA TTAAAGAAGG CAGTGAAGCT GAATTTATTA CCGAACATTA CTGGGGGTAT ACAAAGCTTT CTGATAAAAA AACTTCTGCA TATGAAGTAA TTCACCCGCG CTGGAAAGTA TACCGCATGC ACAATCTGAA TTTTTCATTC AGCACAAAAG AATTATTCGG CGAAGCTTTT GTACCGTTTC TTGAAACAAA ACCAACGTCT ATCTTTCTGG CAGAAGGTTC CGAAGTACAG GTTATGGGGG GCGGGAAAGT AATTAAATAG
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Protein sequence | MPSPFLTAQW RKLILANYAV DPEILKPYLP EHTELDLWNN TCYVSVVGFL FDAVKIKGFT IPNHHSFPEV NLRFYVRYED NKEWKRGVVF IKEIVPKTMV TFIANTVYGE NYQTLPMRHQ WDMLENEQRI EYEWKVNNKW NYLRVKAGIE PVDIKEGSEA EFITEHYWGY TKLSDKKTSA YEVIHPRWKV YRMHNLNFSF STKELFGEAF VPFLETKPTS IFLAEGSEVQ VMGGGKVIK
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