Gene CHU_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0378 
Symbol 
ID4183439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp449061 
End bp449780 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID638070386 
Producthypothetical protein 
Protein accessionYP_677008 
Protein GI110636801 
COG category[S] Function unknown 
COG ID[COG3361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0504645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCAC CATTCCTTAC AGCCCAATGG AGAAAATTGA TTTTAGCGAA CTATGCAGTA 
GATCCTGAAA TTTTAAAACC CTATTTACCT GAGCATACCG AACTTGATTT ATGGAATAAT
ACCTGTTATG TATCGGTTGT AGGTTTTTTA TTTGATGCCG TAAAGATTAA AGGGTTTACC
ATACCAAACC ACCATTCTTT TCCGGAGGTT AATCTGCGCT TTTATGTGCG TTATGAAGAC
AATAAAGAAT GGAAGCGTGG TGTGGTTTTC ATCAAAGAAA TTGTACCTAA AACCATGGTA
ACATTTATTG CCAACACGGT ATACGGCGAA AATTATCAGA CACTTCCGAT GCGCCATCAA
TGGGACATGC TGGAGAACGA GCAGCGGATT GAATACGAAT GGAAAGTAAA TAATAAATGG
AATTATTTAC GCGTGAAAGC AGGTATTGAA CCTGTAGATA TTAAAGAAGG CAGTGAAGCT
GAATTTATTA CCGAACATTA CTGGGGGTAT ACAAAGCTTT CTGATAAAAA AACTTCTGCA
TATGAAGTAA TTCACCCGCG CTGGAAAGTA TACCGCATGC ACAATCTGAA TTTTTCATTC
AGCACAAAAG AATTATTCGG CGAAGCTTTT GTACCGTTTC TTGAAACAAA ACCAACGTCT
ATCTTTCTGG CAGAAGGTTC CGAAGTACAG GTTATGGGGG GCGGGAAAGT AATTAAATAG
 
Protein sequence
MPSPFLTAQW RKLILANYAV DPEILKPYLP EHTELDLWNN TCYVSVVGFL FDAVKIKGFT 
IPNHHSFPEV NLRFYVRYED NKEWKRGVVF IKEIVPKTMV TFIANTVYGE NYQTLPMRHQ
WDMLENEQRI EYEWKVNNKW NYLRVKAGIE PVDIKEGSEA EFITEHYWGY TKLSDKKTSA
YEVIHPRWKV YRMHNLNFSF STKELFGEAF VPFLETKPTS IFLAEGSEVQ VMGGGKVIK