Gene CHU_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0332 
Symbol 
ID4185514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp397577 
End bp399145 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content38% 
IMG OID638070340 
Producthypothetical protein 
Protein accessionYP_676962 
Protein GI110636755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGTT TAATCTGGAT AAACAACCGG AACAAATTCG TGATTAAAGG CCTGCGACCC 
ATACTCGCTT TTTTTTTAAG TATTGTATCA TTTTTTACCG TACAAGCTCA GGCCGATACA
AGCAACAAGA TTACCGGTGC AAAAGCTGCT GCTATTCAGA AAACAGCTAC TGTATCAAAA
CCTCCTGTTG AATACAAACA CTTTCCCAGT ACATCCGCAT TCAGTCTTGC CCTGAAAAAT
AAATCATTTT TAAGTACGTA TGCTGTCGTA TCTGTTGTTG ATACCGTTGC AGGAATTCTC
CGTAAAAAGA CAGGTATTGT TTCGAACAAT AAACTTATTG TTCCTTTTGA ATACGATTCG
GTATTATTTA TAAACCAACA TGAATTTATT GTACAGGCGC ACATTGTTAC TAAAAGAACA
TATGCCTGTA ATTACCTGAT CCTGGATGCA CAGAAAAATA GCGTTATTGA TTTTAAAGCT
ATACGTATTA CATTTTTAGG AAATCATTTA TATGATATCC ATACGGCAAC AAACCGTTTC
CTATACAACA GCCTTACCAA ACGTTCCAGT GCAACCTTCG ATCGGTTTGC TATACTGGAC
AGTGCTTTTA TTCTGCTCAC TACGGCTTCC GAATATCAGC TGTGTGATCA TTCACTGAAT
GATTTTATTT CTTCTCCGTT TAAAGTTTTA TTGCAGGCAA ACGATTCAAC CTATAACGCG
GTGCTGTATA CGGAATGGGA TATATATAAA CACACGGGCG AAAAATTATT CTCTGCTGTG
CGCTGTGATT CCATAAAAGC ATCAGCTGAG CCCGCCACCT GGGATGTATA CCGCAACGGC
AATGTTTACC ACCGCCGGTA TATCAGCCGT GCTGAAACAC CGTTGATTGT TCATACGGAT
TCCATCACGT ATTCAAAAAC GCTTAATATC AGTAAATTGA AATACGATAC CATTAAAACC
ATGCTGCGCT TTGATACGGT TTATTACCAG AGCGATAATT TATTGATGTA TAAAAAGGCC
GGCAAGTATG GTTATTCAGA TACCATCGGC AATGTAAAGA TCTCGCATCA ATACGATACT
ATAACGGCAT GGCATGAAAA TATGGCGGCT TTTATGTTCA AAAAAAAATG GGGCTACCTG
ACGCGCCGCG AAGAGCTTAC CGTACAGCCG TATTACATGA TTGCACTTCC GTTTAGTAAT
GGAGCAGCTC CCGTATATGA CGGCAAAAAA TGGATGTTCA TTACCAAAAA CGGAAAGAAC
ATAAATTCTG TTATGTATGA CAGTATTCAA AAAACAATCA GCGGTAAATG GTATGTATTC
AGCAAAGGTC TTGCCGGTCT GTGTGATGTT ACAGGCAGAG AATTGATACC TCCTGTATAT
GAATATTTAT TGGATGCAGG TTCTGATGTA TACGTATTTA AAAAAGAATA TCTGTATGGT
TTGATCGGCC GTGACAGAAC GATTATCTGT AAACCGATGT ACGATGCATT TCAATATGAC
AAAGGTAATA ATTGTCTGCT GTTGAAACAG CTCTATCAAA CGCCGCTTTT ATTTGTCATT
CATAAATAA
 
Protein sequence
MTCLIWINNR NKFVIKGLRP ILAFFLSIVS FFTVQAQADT SNKITGAKAA AIQKTATVSK 
PPVEYKHFPS TSAFSLALKN KSFLSTYAVV SVVDTVAGIL RKKTGIVSNN KLIVPFEYDS
VLFINQHEFI VQAHIVTKRT YACNYLILDA QKNSVIDFKA IRITFLGNHL YDIHTATNRF
LYNSLTKRSS ATFDRFAILD SAFILLTTAS EYQLCDHSLN DFISSPFKVL LQANDSTYNA
VLYTEWDIYK HTGEKLFSAV RCDSIKASAE PATWDVYRNG NVYHRRYISR AETPLIVHTD
SITYSKTLNI SKLKYDTIKT MLRFDTVYYQ SDNLLMYKKA GKYGYSDTIG NVKISHQYDT
ITAWHENMAA FMFKKKWGYL TRREELTVQP YYMIALPFSN GAAPVYDGKK WMFITKNGKN
INSVMYDSIQ KTISGKWYVF SKGLAGLCDV TGRELIPPVY EYLLDAGSDV YVFKKEYLYG
LIGRDRTIIC KPMYDAFQYD KGNNCLLLKQ LYQTPLLFVI HK