Gene CHU_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0331 
Symbol 
ID4185513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp395573 
End bp397570 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content39% 
IMG OID638070339 
Producthypothetical protein 
Protein accessionYP_676961 
Protein GI110636754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGCT TTCTTTCGAT CATTATACTT CTTCATTTTT TTTTCTCCGG ACAAACGCAA 
ACGGTTCAGT ACAATGAAGG CTTAACTGTT TTTAAAGAAA CAAAAAATGG AAAACAACAA
GCCGGCTTCA AAGATAAATC AGGCAAGGTT ATTATACCCG CACGTTTCGA TAGTATTGCA
GCGCCTTTCA GCAACGGACA GGCAATTGTT GTTATAAATA ATTTATATGG CACTATTGAT
CTTAAAGGAA AACCGATCAT ACCTGCCATC TATAAAAAAA TATTACCGCA ATCGTTTGGC
TTAACACCTG TACAAAACAA AGCCGGCTTA TGGGGTTTTT ATAATACGGC GCCTAAGCTT
GTAATTCCAT GCCTGTACAA CAATTTTAAA TTTACAAACA AAGGCAAACA GCTCTTTGCA
CAACAGGATG GAAAGTGGGG AATGCTCTCT CTTGCCAATG AAGTTCTGGT TCCGTTTAAT
TTCAAATCCA TTGAATTACT TTCTCCCAAA CAGGTCCGCG GCACCTTGTT TGATTCCTGG
GAACGCATGT CACAAACGGG TATCGTACTG GCAACGTATG AATATGATTC GGTATTGTTT
ACCACATCCA GGGAATTGAG TTATTATCAG AATGGGTGGC AGGGCCTGTT AAATCCGGAT
GGCAGCATTG CGTTAAAAAA TAATTTCGAA GCGCTCGGAG ATCTTGTCGG AGATTATGTA
GCGATCAAAC AAAATAATAA ATGGGGCGTT AAAAAAACAA ACGCTGAAGG GTGGATTCTT
GAGCCCGCGT ATGATATTAT CCACCTGGAT TCATTGATGA TCTACGCAGG TCTTACTGTT
GGCCGGAATG CTGTTCACTG GAAATTATAT GCGTATTCAG GTTCGTTGTT ATATCCAAAC
GTATTAAGCG ATTATCAGCC ATTTTCAAAT GGGCTGTTTG CTGCAAAATC ACTTACGAAC
AAATGGGGTT TCCTGAATGA AAAAGGAGAA GAAGTAATTC CTTTTCAGTA TTCAGGCGTA
GGTGCCTTTT ATTATGGGTT GTGTGATGTT AAAAAAGATG GGCAGAATTT AGTGATCAAC
AAATCCGGAG AAGTGGTATT GAACCAGCGG GATATTTATT TACACTCAAT CGGTCTGTTA
AAAGTAAATG CTTTGCAGGA TAAAACGTAT AACACGTCAG GCATAGAAGC AGGCATAGAG
ATCATTCCCT TTAACGCAAG TTTCATCAAG CTGAAAAAGG GGGATAAATA CGGCTTGATT
AATACCAAAG GCGAACAAAT TCTTCCGATC ATTTATTCAA ACATTTCAAC CGGCAGCAGC
ACTAAAACAT TCAGTGTTAC AAAAGACAGA CAAATCAAGG TATTGCAGCC AGGCGGAAGC
ACGTATCCCG TAGATAAAAA AATTATTTCC TTAGATGGTT TCTACAATGA ATATGCCTGC
ATGAAATACA ACAATGGCAA ATACGGGTAT GTAGATCATC AGGGGAAAAT ACGCATTGCC
CCGCAGTATG ACCAGGCACG GCCGTTTGAT CATGAAGTTG CAATCATTAA ACTGAACGGA
AAATGGGGCA TCATCAATAA ATATGAAAAT TTTGTAGCAC AGCCGTATTA CGATTCAATC
AGCAACTTTA AAAACAATGT TGCCATTGCA CTGGAAAAAG GTATTTACTA TTTGATTGAT
CCGTCCGGGA AAATATTAAC GCCGGATGGA TATACATCTA TTACGTTAAC GGCTGGCGGC
AATTATTTAT TGATTAAAAA TAATTTCCGA GGAATAGCCA ATGCACGCGG CAAAGAAATC
ATTGCAGCGC GATACCAAAG TATTACTGAA CTCTCTCCTA CGCTTTTTAA AGTGTCTGAA
AATGATTTAA AAGGTGTGAT TGATGCGGAC CGGAAAATCA TTCTGCACAT TAAATATCTT
GAAATATTTT ATAACAGCCG GACCAAAGAA TTTTTAGCAG CGGAAGAGGG CGCGCAGAAA
TATATTACGG TGAAGTAG
 
Protein sequence
MLRFLSIIIL LHFFFSGQTQ TVQYNEGLTV FKETKNGKQQ AGFKDKSGKV IIPARFDSIA 
APFSNGQAIV VINNLYGTID LKGKPIIPAI YKKILPQSFG LTPVQNKAGL WGFYNTAPKL
VIPCLYNNFK FTNKGKQLFA QQDGKWGMLS LANEVLVPFN FKSIELLSPK QVRGTLFDSW
ERMSQTGIVL ATYEYDSVLF TTSRELSYYQ NGWQGLLNPD GSIALKNNFE ALGDLVGDYV
AIKQNNKWGV KKTNAEGWIL EPAYDIIHLD SLMIYAGLTV GRNAVHWKLY AYSGSLLYPN
VLSDYQPFSN GLFAAKSLTN KWGFLNEKGE EVIPFQYSGV GAFYYGLCDV KKDGQNLVIN
KSGEVVLNQR DIYLHSIGLL KVNALQDKTY NTSGIEAGIE IIPFNASFIK LKKGDKYGLI
NTKGEQILPI IYSNISTGSS TKTFSVTKDR QIKVLQPGGS TYPVDKKIIS LDGFYNEYAC
MKYNNGKYGY VDHQGKIRIA PQYDQARPFD HEVAIIKLNG KWGIINKYEN FVAQPYYDSI
SNFKNNVAIA LEKGIYYLID PSGKILTPDG YTSITLTAGG NYLLIKNNFR GIANARGKEI
IAARYQSITE LSPTLFKVSE NDLKGVIDAD RKIILHIKYL EIFYNSRTKE FLAAEEGAQK
YITVK