| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0325 |
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| Symbol | sotB |
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| ID | 4185507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 391197 |
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| End bp | 392408 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070333 |
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| Product | sugar efflux transporter |
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| Protein accession | YP_676955 |
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| Protein GI | 110636748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCA CTCAAAAAAG CGCCATCAAC GAAGGCTTGT TAATAGCCAT GCTGGCAGCA
ATCAATTTTA CACACATCAT GGATTTTGTA ATTATGGCTC CCTTAAGTGC TACGTTAAAA
ATAGCCATGT CAATTACAAC AAAGGAGTTT GGGTATCTGG TATCCATTTA CACATTTGCT
GCTGCCGTAG GTGCTATTAT CGCATTCTTT AAGATTGATA AGTATGACAG AAGAACAGCA
ATCATCTTTG TGTATACAGG ATTTATAGTT GCAAATATAT TATGTGCATT GGCACCGCAA
TATAAATTCT TTATGCTGGC GCGTCTGTTC GCAGGTTTAT TCGGTGGTGT GTTAAACGTG
TTGATCATGT CGGTCATCGG AGATGTTATT CCGTTAGAAC GCAGAGGTAA AGCAACCGGT
ATGGTGATGG CTGCTTTTTC AGCGGCATCC GTAATTGGTA TCCCGAGCGG CTTGATCCTG
GCTGATATAT TTAAAGACTA TCACGCACCG TTCTGGCTGC TTTCTATATT AAGCGCGCTT
GTCGGGTTTG TACTGGTATT TAAATTCCCT TCCATTAAAA GCCATATGGA GTTTGAAGGT
GCTAAAACAC CTCCAATGGA AATTATTAAA GAATACATGC AGAATTCAAA TGTACGCAGA
GCCTTGTTGT TTATCTTTTT ACTAATGATT GCAGGCTTTT CCGTTGTACC ATTTATAAGC
GATTATCTGG TAAATAATGT TGGCCTGGAT TTGAAGGAAT TGAAATACGT GTATTTGTGC
GGAGGATTAG CTACTGTTGC AAGTAGTATA TTTATCGGTC GCTTATCAGA TAAGCTGGGT
AAAGTAAAAA CATTTATCAT TGCCGCATTG GTATCCGTTG CACCAATCGC TATTGTAACG
GTATTGCCGG TTATGCCACT AAAACATGTT TTATTGTTTA ACGTGTTATT CTTTATGTGC
TTTGGTGCAA GATTTGTTCC GGCTATGACA CTAATGACTT CCTGTGTTCA GCCCAAACGC
CGGGGAAGTT TTTTAAGTGT AAGCTCTGCA ATACAACAGC TGGGTTCAGG TGTTGCAGTG
CTGATTGCAT CCGCCATTAT TGTGAATGGT CCGAAAGGCG AATTACACAA TTTTGGCTGG
GTGGGTATTG TGGCATGTGT TGCTACCGTA ATAAGCATTC TGCTTTCTGT TCGTATTAAA
GAAGTTTCTT AA
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| Protein sequence | MQPTQKSAIN EGLLIAMLAA INFTHIMDFV IMAPLSATLK IAMSITTKEF GYLVSIYTFA
AAVGAIIAFF KIDKYDRRTA IIFVYTGFIV ANILCALAPQ YKFFMLARLF AGLFGGVLNV
LIMSVIGDVI PLERRGKATG MVMAAFSAAS VIGIPSGLIL ADIFKDYHAP FWLLSILSAL
VGFVLVFKFP SIKSHMEFEG AKTPPMEIIK EYMQNSNVRR ALLFIFLLMI AGFSVVPFIS
DYLVNNVGLD LKELKYVYLC GGLATVASSI FIGRLSDKLG KVKTFIIAAL VSVAPIAIVT
VLPVMPLKHV LLFNVLFFMC FGARFVPAMT LMTSCVQPKR RGSFLSVSSA IQQLGSGVAV
LIASAIIVNG PKGELHNFGW VGIVACVATV ISILLSVRIK EVS
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