Gene CHU_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0310 
Symbol 
ID4186876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp372022 
End bp373155 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content37% 
IMG OID638070319 
Producthypothetical protein 
Protein accessionYP_676941 
Protein GI110636734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACT CTATAGTTCA TTCAATAGTA TTTTTTTCAA TAATACTTGT ATTAGGGTCT 
TGTGGTAACA AAGATAAAGG CACAACTGTT CCGGAAGGAA ACCCTTCAGA TAGAGAGGCA
ATGCTTAAAA ATGTTGCTGA TAATATTGTA ATTCCTGCAA ACGCTAAATT TGAAATAAAG
CTGGATAATA TGATTGCAAA ATCAGATGTA TTCAGAAACA ATCCTACAGT AACTACATTA
TCTGAATACA GAATTGCCTG GGCAGAAGCT TATATTGAGT GGCAAAAGAT CGGGATTTTT
GATTTTGGTC CGGCTGCAGA TGTTGCGCTG AATTCATATA TGAATGTATA TCCGGCAAAT
GTCTCAAATA TAAATGCGAA TATACTTTCT GGTAATGCGA ATCTTGAAGT ATTCGAATCT
TATTCAGCAC AAGGCTTTCC CGCTATTGAT TATCTGATCA ACGGTTCAGC GGATACAGAT
GATGATATTG TTGCTTTATA TGTAACGGGC GAAGATGCAG ATAAACGTAA AGCATATTTA
TTAAGACTTA CCAATCAGAT GCATGCAAAG TTTGAAGCGG TAAATGCTGC CTGGAAAGGT
GATTACAGAA ATACATTTGT TTCAAGTACC GGTACTGGAT TAAATGCATC AACGTCTGTA
ATGGTAAACG GTATTGTTTT TTATTACGAA CGTTTTATCC GTTCCGGCAA ATTCGGTATT
CCGTCAGGAG CCATGACCGG AACGCCATTG AATGCGTCTG TTGAAGCCTA TTATAAAAAA
GATATCGGCA AGATCTTAGC ACAAACGGCG CAGCAGGCTT TCGTAGATTA TTTTAATGGT
AAGGGCGTAA CAACTGGTAT TGAAGGGCCA TCTTTAAAAA CATATCTGAA TGCACTGGAT
GCAAAGGATG CAACTACAAA GCAACCTTTA TCGGAGATTA TTAATAATCA GTTTACAGTT
GTTGACAGTA AATTAAACGT GTTGTCTGAT AACTTAAGCA ATGAGGTTTT AACAAACAAG
GCTGCTATGG TCGCTGTGTA TAATGAAATG CAGAAGGCTG TACGTATGCT TAAAGTGGAT
ATGACATCTG CCTTGAGTGT AACCATTACC TATACAGATA ACGACGGGGA TTGA
 
Protein sequence
MKYSIVHSIV FFSIILVLGS CGNKDKGTTV PEGNPSDREA MLKNVADNIV IPANAKFEIK 
LDNMIAKSDV FRNNPTVTTL SEYRIAWAEA YIEWQKIGIF DFGPAADVAL NSYMNVYPAN
VSNINANILS GNANLEVFES YSAQGFPAID YLINGSADTD DDIVALYVTG EDADKRKAYL
LRLTNQMHAK FEAVNAAWKG DYRNTFVSST GTGLNASTSV MVNGIVFYYE RFIRSGKFGI
PSGAMTGTPL NASVEAYYKK DIGKILAQTA QQAFVDYFNG KGVTTGIEGP SLKTYLNALD
AKDATTKQPL SEIINNQFTV VDSKLNVLSD NLSNEVLTNK AAMVAVYNEM QKAVRMLKVD
MTSALSVTIT YTDNDGD