| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0236 |
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| Symbol | tpn |
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| ID | 4185537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 285808 |
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| End bp | 286269 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638070246 |
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| Product | transposase |
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| Protein accession | YP_676868 |
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| Protein GI | 110636661 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1943] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.172698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGGTA CTTTTTCGCA AATGTATATT CAGATTGTTT TTGCAGTTAA AGGAAGAAAT
AGTCTTATTC ATCCCTCATG GGAAAATGAA TTGCACAAAT ACATGACAGG ATTTATTCAG
AATAACGGAC AAAAACTTTT GGCAATAAAT GGTATGCCTG ATCACATACA TATTCTAATC
GGGATGAAAC CATCGTGTTG CCTCTCTGAT TTAATCAGAG AGTTAAAAAA ATCTTCTTCA
TCATTTATAA AGGATAAGAA ATTATCCCCG TATGCATTTC AATGGCAGGA AGGTTATGGT
GCTTTTTCGT ACAGCCATTC TAACCTGAAT CAGGTAATCG CTTACATCAT GAATCAAAAG
GAACACCATA AGAAAAGAAC ATTCAAAGAA GAATATCTGG AATTCATTCA AAAGTTTGAG
CTTGAATATA ATCCAAAGAA TTTGTTTGAA TGGATGGATT GA
|
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| Protein sequence | MPGTFSQMYI QIVFAVKGRN SLIHPSWENE LHKYMTGFIQ NNGQKLLAIN GMPDHIHILI
GMKPSCCLSD LIRELKKSSS SFIKDKKLSP YAFQWQEGYG AFSYSHSNLN QVIAYIMNQK
EHHKKRTFKE EYLEFIQKFE LEYNPKNLFE WMD
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