Gene CHU_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0233 
Symbolhsp20 
ID4185534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp283405 
End bp283842 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content36% 
IMG OID638070243 
Productsmall heat shock protein 
Protein accessionYP_676865 
Protein GI110636658 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.818598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0970629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG TAAAAAGAAA CGGACACTTC CCATTTATTT TTGACGACTT CTTTAACCGT 
CAGTATAATC GGGGCATGGC AGACTATTCA AATACAAATA CAACAATTCC TGCCGTGAAT
ATAAAAGAAT CTGCTGAAAA TTTTGTGATT GAAGTGGCTG CACCTGGCAT GAATAAAAAA
GATTTTAATG TGCAGGTGGA TGGTAATGTC TTGACTATCC GTTCAGAAAA AACAACCGAA
AAAGAAGATG CGAATAATGA AAAATATACT ACCCGCGAAT TCAGTTACCA GTCTTTTGTA
AGAACATTTA ATCTTCCGAA AGATATAGCT GACACGGATA AGATCGAGGC TAAATATGAA
GATGGTGTAT TGCATGTACT GATTCCTAAA AAGGAAAAAG AGAAAGTGAA AGAATCAAGG
CTTGTAGAAG TTGTCTGA
 
Protein sequence
MTIVKRNGHF PFIFDDFFNR QYNRGMADYS NTNTTIPAVN IKESAENFVI EVAAPGMNKK 
DFNVQVDGNV LTIRSEKTTE KEDANNEKYT TREFSYQSFV RTFNLPKDIA DTDKIEAKYE
DGVLHVLIPK KEKEKVKESR LVEVV