Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0233 |
Symbol | hsp20 |
ID | 4185534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 283405 |
End bp | 283842 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070243 |
Product | small heat shock protein |
Protein accession | YP_676865 |
Protein GI | 110636658 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.818598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0970629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTG TAAAAAGAAA CGGACACTTC CCATTTATTT TTGACGACTT CTTTAACCGT CAGTATAATC GGGGCATGGC AGACTATTCA AATACAAATA CAACAATTCC TGCCGTGAAT ATAAAAGAAT CTGCTGAAAA TTTTGTGATT GAAGTGGCTG CACCTGGCAT GAATAAAAAA GATTTTAATG TGCAGGTGGA TGGTAATGTC TTGACTATCC GTTCAGAAAA AACAACCGAA AAAGAAGATG CGAATAATGA AAAATATACT ACCCGCGAAT TCAGTTACCA GTCTTTTGTA AGAACATTTA ATCTTCCGAA AGATATAGCT GACACGGATA AGATCGAGGC TAAATATGAA GATGGTGTAT TGCATGTACT GATTCCTAAA AAGGAAAAAG AGAAAGTGAA AGAATCAAGG CTTGTAGAAG TTGTCTGA
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Protein sequence | MTIVKRNGHF PFIFDDFFNR QYNRGMADYS NTNTTIPAVN IKESAENFVI EVAAPGMNKK DFNVQVDGNV LTIRSEKTTE KEDANNEKYT TREFSYQSFV RTFNLPKDIA DTDKIEAKYE DGVLHVLIPK KEKEKVKESR LVEVV
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